RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 GORASP1Q9BQQ3 440 aa7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 TACO1Q9BSH4 297 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 BTBD2Q9BX70 525 aa7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 QRSL1Q9H0R6 528 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 CCM2LQ9NUG4 571 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 IP6K2Q9UHH9 426 aa7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 TRIOBPQ9H2D6 2365 aa7.26□□□□□ -1.25
HERPUD1-208ENST00000563911 KLHL33A6NCF5 533 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 TRIM75PA6NK02 468 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 LPLP06858 475 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 IGFBP6P24592 240 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 TMPOP42166 694 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 ITGA1P56199 1179 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 LRRC41Q15345 812 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 TOR2AQ5JU69 321 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 TSR2Q969E8 191 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 PRMT6Q96LA8 375 aaPredicted RBP7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 DEFB129Q9H1M3 183 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 ZFP69BQ9UJL9 534 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 ZNF180Q9UJW8 692 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 XDHP47989 1333 aa7.25□□□□□ -1.25
HERPUD1-208ENST00000563911 MANSC4A6NHS7 340 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDH8O95206 1070 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 CT47B1P0C2W7 299 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 APEX1P27695 318 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 RECQLP46063 649 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 LIMS1P48059 325 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 BCAR1P56945 870 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 DLG4P78352 724 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 SP3Q02447 781 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 PITRM1Q5JRX3 1037 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 STRIP1Q5VSL9 837 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 KANSL1Q7Z3B3 1105 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 ARMC9Q7Z3E5 817 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 UBE2Q1Q7Z7E8 422 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 WDR75Q8IWA0 830 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 CHPFQ8IZ52 775 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 FAM43AQ8N2R8 423 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 SLC17A8Q8NDX2 589 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 BRI3BPQ8WY22 251 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 NOX5Q96PH1 765 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 MYD88Q99836 296 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 C11orf84Q9BUA3 381 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 WNT8AQ9H1J5 351 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 OR10A5Q9H207 317 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 GREM2Q9H772 168 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 GCM1Q9NP62 436 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 BABAM1Q9NWV8 329 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 CROTQ9UKG9 612 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 NUMBLQ9Y6R0 609 aa7.24□□□□□ -1.25
HERPUD1-208ENST00000563911 CLRN2A0PK11 232 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 MAFGO15525 162 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 TSPAN6O43657 245 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA12O60330 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 SCGB1D2O95969 90 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 IL18BPO95998 194 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCCAP05165 728 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 IGKV5-2P06315 115 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 CCT4P50991 539 aaKnown RBP7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 INHBEP58166 350 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 ADAM9Q13443 819 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 SMAD4Q13485 552 aaKnown RBP7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 TTLL5Q6EMB2 1281 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 CCDC146Q8IYE0 955 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 KYQ8NBH2 561 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 JPH3Q8WXH2 748 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 ZBTB8AQ96BR9 441 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 ERO1AQ96HE7 468 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 RAX2Q96IS3 184 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 CDH19Q9H159 772 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 INVSQ9Y283 1065 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA9Q9Y5G4 932 aaKnown RBP7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA8Q9Y5G5 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA7Q9Y5G6 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA6Q9Y5G7 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA3Q9Y5H0 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 PCDHGA2Q9Y5H1 932 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 MYPNQ86TC9 1320 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 LAMB1P07942 1786 aa7.23□□□□□ -1.25
HERPUD1-208ENST00000563911 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 ABLIM3O94929 683 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 MTHFD2P13995 350 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 LGALS4P56470 323 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 KRT85P78386 507 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 IL13RA1P78552 427 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 ODF1Q14990 250 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 TEPSINQ96N21 525 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 WRNIP1Q96S55 665 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 KCTD10Q9H3F6 313 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 MTG2Q9H4K7 406 aa7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 DBF4Q9UBU7 674 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 NOB1Q9ULX3 412 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-208ENST00000563911 JAG2Q9Y219 1238 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 853 ms