RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PHOX2BQ99453 314 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 TCHPQ9BT92 498 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 PLEKHA5Q9HAU0 1116 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 AVENQ9NQS1 362 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 SLC2A4RGQ9NR83 387 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 LARSQ9P2J5 1176 aaKnown RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 FBXL21Q9UKT6 434 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 CDH7Q9ULB5 785 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 MAFFQ9ULX9 164 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 SMC3Q9UQE7 1217 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 CFAP54Q96N23 3096 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 OBSL1O75147 1896 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 COL4A2P08572 1712 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SFI1A8K8P3 1242 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 H0Y858 1186 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 H7C4K7 107 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 PODXLO00592 558 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 NARSO43776 548 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 TBC1D4O60343 1298 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 ABLIM3O94929 683 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 PIGRP01833 764 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 ATF2P15336 505 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 TKTP29401 623 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 LONP1P36776 959 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 ZNF131P52739 623 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 MCL1Q07820 350 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 MRPL58Q14197 206 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SLC10A6Q3KNW5 377 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 ARSHQ5FYA8 562 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 VARS2Q5ST30 1063 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 LARP1BQ659C4 914 aaKnown RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 TPGS2Q68CL5 300 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 GRASPQ7Z6J2 395 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 CCDC105Q8IYK2 499 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SIX5Q8N196 739 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SLC7A14Q8TBB6 771 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 RSAD2Q8WXG1 361 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 ATOH1Q92858 354 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 FGF13Q92913 245 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 CALML4Q96GE6 196 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SUSD3Q96L08 255 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 OXCT2Q9BYC2 517 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-203ENST00000554074 GOLGA2P5Q9HBQ8 144 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 CDY1Q9Y6F8 540 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 NUMBLQ9Y6R0 609 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 TICRRQ7Z2Z1 1910 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 SPTBN4Q9H254 2564 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
SLIRP-203ENST00000554074 TTC26A0AVF1 554 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 KRBA1A5PL33 1030 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 M0QZQ0 153 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CCL16O15467 120 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CLDN3O15551 220 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 MEFVO15553 781 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 XPOTO43592 962 aaKnown RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 MICAL2O94851 1124 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ADRB2P07550 413 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CFHP08603 1231 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CLTAP09496 248 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 MYBP10242 640 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CYP3A5P20815 502 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 PDCP20941 246 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 PAX3P23760 479 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 IGFBP6P24592 240 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 LRPAP1P30533 357 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 UBA7P41226 1012 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 BRCC3P46736 316 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 AARSP49588 968 aaKnown RBP eCLIP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 STARD6P59095 220 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 OSTNP61366 133 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ROR1Q01973 937 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CUL4AQ13619 759 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ZRSR1Q15695 479 aaKnown RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ZBTB6Q15916 424 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 PABPC1LQ4VXU2 614 aaKnown RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 HAUS6Q7Z4H7 955 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CD302Q8IX05 232 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 TCEAL8Q8IYN2 117 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 APPL2Q8NEU8 664 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 FLCNQ8NFG4 579 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ZBTB45Q96K62 511 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 REEP2Q9BRK0 252 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 CCSER1Q9C0I3 900 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ST6GALNAC4Q9H4F1 302 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ARHGEF3Q9NR81 526 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 BLOC1S4Q9NUP1 217 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 GDE1Q9NZC3 331 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ANKFY1Q9P2R3 1169 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 DNMT3BQ9UBC3 853 aaKnown RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 NUB1Q9Y5A7 615 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 GVINP1Q7Z2Y8 2422 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 KIF26AQ9ULI4 1882 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-203ENST00000554074 GREB1Q4ZG55 1949 aa7.21□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF292O60281 2723 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 OTOGLQ3ZCN5 2332 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 A0A0B4J269 797 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 WDR27A2RRH5 827 aa7.2□□□□□ -1.26
SLIRP-203ENST00000554074 I3L4J1 428 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms