RNA–Protein interactions for RNA: ENST00000552017.1

CBX3P5-201, Transcript of chromobox 3 pseudogene 5, humanhuman

BASIC

Gene CBX3P5, Length 521 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P5-201ENST00000552017 CCNCP24863 283 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 ZFP36P26651 326 aaKnown RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 RDXP35241 583 aaKnown RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 PTGS2P35354 604 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 TRAPPC10P48553 1259 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 U2AF1Q01081 240 aaKnown RBP eCLIP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC15Q0P6D6 951 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 FSTL1Q12841 308 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 BIRC3Q13489 604 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 DDB1Q16531 1140 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 MAN2A1Q16706 1144 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 MUM1Q2TAK8 710 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 TTC31Q49AM3 519 aaPredicted RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC122Q5T0U0 273 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 AP1ARQ63HQ0 302 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC80Q76M96 950 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 LRRTM3Q86VH5 581 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 CXorf67Q86X51 503 aaPredicted RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 SYNPOQ8N3V7 929 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 FERMT2Q96AC1 680 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 LENG9Q96B70 501 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 VMP1Q96GC9 406 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 NAF1Q96HR8 494 aaKnown RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 ZNF496Q96IT1 587 aaPredicted RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 GSDMAQ96QA5 445 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 SH3GL3Q99963 347 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 UTP14AQ9BVJ6 771 aaKnown RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 ALDH8A1Q9H2A2 487 aaPredicted RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 UNC45AQ9H3U1 944 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 TYW1Q9NV66 732 aaKnown RBP4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 DCAF16Q9NXF7 216 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 SEPT10Q9P0V9 454 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 ATP8A1Q9Y2Q0 1164 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 PIK3R4Q99570 1358 aa4.64□□□□□ -1.67
CBX3P5-201ENST00000552017 NRP1O14786 923 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CPLX1O14810 134 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 KIF3BO15066 747 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 LDHAP00338 332 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PFKMP08237 780 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 FAM163BP0C2L3 166 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 TGM1P22735 817 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 HOXD10P28358 340 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 USP8P40818 1118 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CASRP41180 1078 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 NEK4P51957 841 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 ZBTB17Q13105 803 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PDIA5Q14554 519 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PCBP1Q15365 356 aaKnown RBP eCLIP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 TCEA2Q15560 299 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC184Q52MB2 194 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CNNM4Q6P4Q7 775 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 SEPT14Q6ZU15 432 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 ESPNLQ6ZVH7 1005 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 TRIM74Q86UV6 250 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 TRIM73Q86UV7 250 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 C11orf74Q86VG3 221 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CHPFQ8IZ52 775 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CDYL2Q8N8U2 506 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 SMC1BQ8NDV3 1235 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 FRAT1Q92837 279 aaPredicted RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 HAS1Q92839 578 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 CENPTQ96BT3 561 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PAWRQ96IZ0 340 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 BAG1Q99933 345 aaPredicted RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 RABEP2Q9H5N1 569 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 RPAP3Q9H6T3 665 aaPredicted RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 UPF2Q9HAU5 1272 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PCDH12Q9NPG4 1184 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 DDX56Q9NY93 547 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 ZMAT5Q9UDW3 170 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 BARX2Q9UMQ3 279 aaPredicted RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 G3BP2Q9UN86 482 aaKnown RBP4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 SORCS3Q9UPU3 1222 aa4.63□□□□□ -1.67
CBX3P5-201ENST00000552017 PCSK5Q92824 1860 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 ST20-MTHFSA0A0A6YYL1 179 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 GTPBP10A4D1E9 387 aaKnown RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 F8VZ95 297 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 HOXA3O43365 443 aaPredicted RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 CAND2O75155 1236 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 CDC45O75419 566 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 RNASEH2AO75792 299 aaKnown RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 BBOX1O75936 387 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 YY1P25490 414 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 ALDH1B1P30837 517 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 KPNA1P52294 538 aaPredicted RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC173Q0VFZ6 552 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 PRPF4BQ13523 1007 aaKnown RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 SMC1AQ14683 1233 aaKnown RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 RBBP5Q15291 538 aaKnown RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 CNGA3Q16281 694 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 CCDC152Q4G0S7 254 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 LAIR1Q6GTX8 287 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 SYNE3Q6ZMZ3 975 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 LRRC55Q6ZSA7 311 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 C16orf86Q6ZW13 317 aa4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 ZNF771Q7L3S4 317 aaPredicted RBP4.62□□□□□ -1.67
CBX3P5-201ENST00000552017 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms