RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ZRSR1Q15695 479 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 TCEAL4Q96EI5 215 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 MCRS1Q96EZ8 462 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 SNX27Q96L92 541 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 NOL7Q9UMY1 257 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 DNM3Q9UQ16 869 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 PODXLO00592 558 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 ABLIM3O94929 683 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 RHOP08100 348 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 CEBPBP17676 345 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 RFX1P22670 979 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 CCR2P41597 374 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 SPAG1Q07617 926 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC10A6Q3KNW5 377 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 PABPC1LQ4VXU2 614 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 TANGO2Q6ICL3 276 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 PJA1Q8NG27 643 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
PRPF40B-212ENST00000551111 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 TSC2P49815 1807 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 XYLBO75191 536 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 SP9P0CG40 484 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 KCNE1P15382 129 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 MRPL58Q14197 206 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 KRT79Q5XKE5 535 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC8B1Q6J4K2 584 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 PDXDC1Q6P996 788 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ANKS3Q6ZW76 656 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ZNF461Q8TAF7 563 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ZSWIM3Q96MP5 696 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 UROC1Q96N76 676 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 CNTN3Q9P232 1028 aa12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-212ENST00000551111 NCANO14594 1321 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 ARHGEF37A1IGU5 675 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 VNN2O95498 520 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 POU2F2P09086 479 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 MCF2P10911 925 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 FCARP24071 287 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 PRPHP41219 470 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 TNFSF9P41273 254 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 DMP1Q13316 513 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 PRSS36Q5K4E3 855 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 ZBTB41Q5SVQ8 909 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 MCTP1Q6DN14 999 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 C1orf210Q8IVY1 113 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 DCLK2Q8N568 766 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 CORO1BQ9BR76 489 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 NTPCRQ9BSD7 190 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 MRPS23Q9Y3D9 190 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 TIMM13Q9Y5L4 95 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-212ENST00000551111 KANSL1LA0AUZ9 987 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 VWA3AA6NCI4 1184 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 FAM170BA6NMN3 283 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 MOSPD3O75425 235 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CXCL8P10145 99 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 GJA1P17302 382 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 GUCY2CP25092 1073 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 CDR1P51861 262 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 ATP2C1P98194 919 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 GRIN1Q05586 938 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 FZD5Q13467 585 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 HYIQ5T013 277 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 MTSS1LQ765P7 747 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 KCNG4Q8TDN1 519 aa12.63□□□□□ -0.39
PRPF40B-212ENST00000551111 SUSD3Q96L08 255 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms