RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ACSF2Q96CM8 615 aaPredicted RBP15.77■□□□□ 0.12
DDX55-209ENST00000542286 VPS33BQ9H267 617 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 AS3MTQ9HBK9 375 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 C1orf112Q9NSG2 853 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 PNMA2Q9UL42 364 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 R3HDM2Q9Y2K5 976 aaKnown RBP15.77■□□□□ 0.12
DDX55-209ENST00000542286 MROH7Q68CQ1 1323 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 SYNGAP1Q96PV0 1343 aa15.77■□□□□ 0.12
DDX55-209ENST00000542286 FZD9O00144 591 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 CSDE1O75534 798 aaKnown RBP15.77■□□□□ 0.11
DDX55-209ENST00000542286 CYP1A2P05177 515 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 SLC29A2Q14542 456 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 CLEC16AQ2KHT3 1053 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 CCDC38Q502W7 563 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 ACAD10Q6JQN1 1059 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 CCDC121Q6ZUS5 278 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 PARP9Q8IXQ6 854 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 PCYT2Q99447 389 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 FAM114A2Q9NRY5 505 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 MAP3K20Q9NYL2 800 aaKnown RBP15.77■□□□□ 0.11
DDX55-209ENST00000542286 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 GGA2Q9UJY4 613 aa15.77■□□□□ 0.11
DDX55-209ENST00000542286 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.77■□□□□ 0.11
DDX55-209ENST00000542286 GZMAP12544 262 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 CD58P19256 250 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 UBA1P22314 1058 aaKnown RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 PAX7P23759 505 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 MAPK4P31152 587 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 ATP13A4Q4VNC1 1196 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 CYB5D1Q6P9G0 228 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 NCAPG2Q86XI2 1143 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 FAXDC2Q96IV6 333 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 RBAKQ9NYW8 714 aaPredicted RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 GTF3C4Q9UKN8 822 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 ADAMTS5Q9UNA0 930 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 NUB1Q9Y5A7 615 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 ATP8B3O60423 1300 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 MYPNQ86TC9 1320 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 K7ERI5 159 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 NEBLO76041 1014 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 CST3P01034 146 aaPredicted RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 SRGAP2CP0DJJ0 459 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 RPS12P25398 132 aaKnown RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 PSMC4P43686 418 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 IFI35P80217 286 aaPredicted RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 VGLL4Q14135 290 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 BRDTQ58F21 947 aaPredicted RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 MIS18BP1Q6P0N0 1132 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 FAM228AQ86W67 206 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 FUKQ8N0W3 1084 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 MCPH1Q8NEM0 835 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 EPS8L3Q8TE67 593 aaKnown RBP15.76■□□□□ 0.11
DDX55-209ENST00000542286 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 DOCK1Q14185 1865 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 LCTP09848 1927 aa15.76■□□□□ 0.11
DDX55-209ENST00000542286 GOLGA6L7A0A1B0GV03 622 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 ADM5C9JUS6 153 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 OATP04181 439 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 QPCTQ16769 361 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 XKR3Q5GH77 459 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 TMC2Q8TDI7 906 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 SCLT1Q96NL6 688 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 DDX23Q9BUQ8 820 aaKnown RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 TIPINQ9BVW5 301 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 PCDHB4Q9Y5E5 795 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 ARID2Q68CP9 1835 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 RGPD3A6NKT7 1758 aaPredicted RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 HMGB1P1B2RPK0 211 aaPredicted RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 PI4K2BG5E9Z4 385 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 PPP1R12AO14974 1030 aaPredicted RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 MAPK13O15264 365 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 UNGP13051 313 aaPredicted RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 CTNNA2P26232 953 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 COILP38432 576 aaPredicted RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 PMS2P54278 862 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 STRN3Q13033 797 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 MCOLN2Q8IZK6 566 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 PSPC1Q8WXF1 523 aaKnown RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 PCDHA3Q9Y5H8 950 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 GSTTP1A0A1W2PQM5 241 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 MIF4GDA9UHW6 222 aaKnown RBP15.75■□□□□ 0.11
DDX55-209ENST00000542286 EXTL3O43909 919 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 TAS2R40P59535 323 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 ORC1Q13415 861 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 E2F5Q15329 346 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 STXBP2Q15833 593 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 GNPTABQ3T906 1256 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 ZACNQ401N2 412 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 GADL1Q6ZQY3 521 aa15.75■□□□□ 0.11
DDX55-209ENST00000542286 C15orf39Q6ZRI6 1047 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms