RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MTCH2Q9Y6C9 303 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 SF3B1O75533 1304 aaKnown RBP eCLIP21.05■□□□□ 0.963e-6■■■■■ 88.4
DDX55-207ENST00000540763 BICDL2A1A5D9 508 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 PPP1R3GB7ZBB8 358 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 PAX3P23760 479 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 CLCNKBP51801 687 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 CYP24A1Q07973 514 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 ELAVL2Q12926 359 aaKnown RBP21.05■□□□□ 0.96
DDX55-207ENST00000540763 CAMK1Q14012 370 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 BMS1Q14692 1282 aaKnown RBP21.05■□□□□ 0.96
DDX55-207ENST00000540763 CCDC183Q5T5S1 534 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 ISM2Q6H9L7 571 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 EFCAB13Q8IY85 973 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 GPR65Q8IYL9 337 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 NOC3LQ8WTT2 800 aaKnown RBP21.05■□□□□ 0.96
DDX55-207ENST00000540763 CACTINQ8WUQ7 758 aaKnown RBP21.05■□□□□ 0.96
DDX55-207ENST00000540763 PAAF1Q9BRP4 392 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 MKNK1Q9BUB5 465 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 HERC2P3Q9BVR0 1158 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 GOLGA2P5Q9HBQ8 144 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 TUBGCP4Q9UGJ1 667 aa21.05■□□□□ 0.96
DDX55-207ENST00000540763 PODXLO00592 558 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 FSCN2O14926 492 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 KIF4AO95239 1232 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 SOD2P04179 222 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 CD44P16070 742 aaKnown RBP21.04■□□□□ 0.96
DDX55-207ENST00000540763 DNAJB1P25685 340 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 WNT7BP56706 349 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 FKBP3Q00688 224 aaKnown RBP21.04■□□□□ 0.96
DDX55-207ENST00000540763 SPAG1Q07617 926 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 FUT10Q6P4F1 479 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 WDR49Q8IV35 697 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 MLKLQ8NB16 471 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 SYAP1Q96A49 352 aaPredicted RBP21.04■□□□□ 0.96
DDX55-207ENST00000540763 ZBP1Q9H171 429 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 PDE11AQ9HCR9 933 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 NGRNQ9NPE2 291 aaKnown RBP21.04■□□□□ 0.96
DDX55-207ENST00000540763 SCN1AP35498 2009 aa21.04■□□□□ 0.96
DDX55-207ENST00000540763 PRRC2BQ5JSZ5 2229 aaKnown RBP21.03■□□□□ 0.96
DDX55-207ENST00000540763 TADA2AO75478 443 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 B3GAT3O94766 335 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 CTSAP10619 480 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 ADAM9Q13443 819 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 TJAP1Q5JTD0 557 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 USP37Q86T82 979 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 RDH13Q8NBN7 331 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 FNBP1Q96RU3 617 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 CGRRF1Q99675 332 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 VN1R3Q9BXE9 311 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 CACNG4Q9UBN1 327 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 SSX2IPQ9Y2D8 614 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 IRAK3Q9Y616 596 aa21.03■□□□□ 0.96
DDX55-207ENST00000540763 TSC2P49815 1807 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 SPTBN5Q9NRC6 3674 aaKnown RBP21.02■□□□□ 0.96
DDX55-207ENST00000540763 ANO9A1A5B4 782 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 CETN3O15182 167 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 TRAPPC3O43617 180 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 IGFBP4P22692 258 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 PSMC2P35998 433 aaKnown RBP21.02■□□□□ 0.96
DDX55-207ENST00000540763 MCCD1P59942 119 aaPredicted RBP21.02■□□□□ 0.96
DDX55-207ENST00000540763 CLDN10P78369 228 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 PAK1Q13153 545 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 KLHL40Q2TBA0 621 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 CT47A1Q5JQC4 288 aaPredicted RBP21.02■□□□□ 0.96
DDX55-207ENST00000540763 CEP135Q66GS9 1140 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 ANKRD40Q6AI12 368 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 VPS52Q8N1B4 723 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 TMC2Q8TDI7 906 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 NELFBQ8WX92 580 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 PPP2R3CQ969Q6 453 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 ANKRD36BP1Q96IX9 119 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 NSUN3Q9H649 340 aaKnown RBP21.02■□□□□ 0.96
DDX55-207ENST00000540763 INTS13Q9NVM9 706 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 DPP3Q9NY33 737 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 DACH1Q9UI36 760 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 ITGA11Q9UKX5 1188 aa21.02■□□□□ 0.96
DDX55-207ENST00000540763 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 F8W810 466 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 SLC16A3O15427 465 aaKnown RBP21.01■□□□□ 0.95
DDX55-207ENST00000540763 TMEM191BP0C7N4 346 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 CASP4P49662 377 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 AP3M2P53677 418 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 PMS1P54277 932 aaKnown RBP21.01■□□□□ 0.95
DDX55-207ENST00000540763 TFAMQ00059 246 aaKnown RBP21.01■□□□□ 0.95
DDX55-207ENST00000540763 SMC1AQ14683 1233 aaKnown RBP21.01■□□□□ 0.95
DDX55-207ENST00000540763 DUOXA2Q1HG44 320 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 C9orf57Q5W0N0 161 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 TTI2Q6NXR4 508 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 CD300LGQ6UXG3 332 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 INTS8Q75QN2 995 aaKnown RBP21.01■□□□□ 0.95
DDX55-207ENST00000540763 C3orf58Q8NDZ4 430 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 PARD3BQ8TEW8 1205 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 PPM1EQ8WY54 764 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 CEP63Q96MT8 703 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 TCF25Q9BQ70 676 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 ENTPD7Q9NQZ7 604 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 CHST7Q9NS84 486 aa21.01■□□□□ 0.95
DDX55-207ENST00000540763 TRIM49BA6NDI0 452 aa21■□□□□ 0.95
DDX55-207ENST00000540763 PIRO00625 290 aa21■□□□□ 0.95
DDX55-207ENST00000540763 AKAP3O75969 853 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms