RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PTPN14Q15678 1187 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 SNRNP35Q16560 246 aaKnown RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 C12orf56Q8IXR9 622 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 GUF1Q8N442 669 aaKnown RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 VN1R2Q8NFZ6 395 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 FBXL18Q96ME1 805 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 COLEC11Q9BWP8 271 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 MTMR12Q9C0I1 747 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 GZF1Q9H116 711 aaPredicted RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 IGFLR1Q9H665 355 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 LMCD1Q9NZU5 365 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 HOOK1Q9UJC3 728 aaKnown RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 UBQLN1Q9UMX0 589 aaKnown RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 TCF20Q9UGU0 1960 aaKnown RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 MTCL1Q9Y4B5 1905 aaKnown RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 TADA2AO75478 443 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 SOD2P04179 222 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 TFAMQ00059 246 aaKnown RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 CYP24A1Q07973 514 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 MORC3Q14149 939 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 CEP135Q66GS9 1140 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 KLHL10Q6JEL2 608 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 PRSS55Q6UWB4 352 aaPredicted RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 ELOA2Q8IYF1 753 aaPredicted RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 XXYLT1Q8NBI6 393 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 PUF60Q9UHX1 559 aaKnown RBP15.2■□□□□ 0.02
VPS11-205ENST00000534551 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
VPS11-205ENST00000534551 SF3B1O75533 1304 aaKnown RBP eCLIP15.19■□□□□ 0.02
VPS11-205ENST00000534551 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 PDXKO00764 312 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 EXOC3O60645 756 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 TBX10O75333 385 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 IL18RAPO95256 599 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 GLP2RO95838 553 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 LDHAP00338 332 aaKnown RBP15.19■□□□□ 0.02
VPS11-205ENST00000534551 URODP06132 367 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
VPS11-205ENST00000534551 TKTP29401 623 aaKnown RBP15.19■□□□□ 0.02
VPS11-205ENST00000534551 LRPAP1P30533 357 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 GLUD2P49448 558 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 DLX2Q07687 328 aaPredicted RBP15.19■□□□□ 0.02
VPS11-205ENST00000534551 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 GLYCTKQ8IVS8 523 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 CCDC127Q96BQ5 260 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 UROC1Q96N76 676 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
VPS11-205ENST00000534551 ASB7Q9H672 318 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 C2CD2Q9Y426 696 aa15.19■□□□□ 0.02
VPS11-205ENST00000534551 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 KIAA0391O15091 583 aaKnown RBP15.18■□□□□ 0.02
VPS11-205ENST00000534551 SPTLC1O15269 473 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 CXCL14O95715 111 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 DLATP10515 647 aaKnown RBP15.18■□□□□ 0.02
VPS11-205ENST00000534551 NR2F2P24468 414 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 MCM4P33991 863 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 TFF2Q03403 129 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 DUSP6Q16828 381 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 C9orf57Q5W0N0 161 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 CEP57Q86XR8 500 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 CD302Q8IX05 232 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 ADSSL1Q8N142 457 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 C1orf127Q8N9H9 656 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 BEST2Q8NFU1 509 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 GOLGA5Q8TBA6 731 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 FEZF2Q8TBJ5 459 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 RIN2Q8WYP3 895 aaPredicted RBP15.18■□□□□ 0.02
VPS11-205ENST00000534551 DDX27Q96GQ7 796 aaKnown RBP15.18■□□□□ 0.02
VPS11-205ENST00000534551 TLE6Q9H808 572 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 DPP3Q9NY33 737 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 CLDND1Q9NY35 253 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 SIX4Q9UIU6 781 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 BARX2Q9UMQ3 279 aaPredicted RBP15.18■□□□□ 0.02
VPS11-205ENST00000534551 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
VPS11-205ENST00000534551 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 ADAM12O43184 909 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 CALUO43852 315 aaPredicted RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 LILRB3O75022 631 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 AKAP3O75969 853 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 ITGB3P05106 788 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 CNPP09543 421 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 POLR2BP30876 1174 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 SNRPFP62306 86 aaKnown RBP15.17■□□□□ 0.02
VPS11-205ENST00000534551 DLG4P78352 724 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 DSG1Q02413 1049 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 PSMD6Q15008 389 aa15.17■□□□□ 0.02
VPS11-205ENST00000534551 CLUL1Q15846 466 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms