RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 DLGAP2Q9P1A6 1054 aa19.14■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 DNMT3BQ9UBC3 853 aaKnown RBP19.14■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 NUB1Q9Y5A7 615 aa19.14■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CFAP54Q96N23 3096 aa19.14■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PTPRZ1P23471 2315 aaPredicted RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 RIF1Q5UIP0 2472 aaKnown RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KANSL1LA0AUZ9 987 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ECI2O75521 394 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ABLIM3O94929 683 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 LMNAP02545 664 aaKnown RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 DCNP07585 359 aaKnown RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PTPN2P17706 415 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SCP2P22307 547 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 BRCC3P46736 316 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SOX4Q06945 474 aaPredicted RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 NOLC1Q14978 699 aaKnown RBP eCLIP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SPECC1Q5M775 1068 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TPGS2Q68CL5 300 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TAS1R3Q7RTX0 852 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TCEAL8Q8IYN2 117 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 DDX23Q9BUQ8 820 aaKnown RBP19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 FANCMQ8IYD8 2048 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PP2D1A8MPX8 630 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 I3L4J1 428 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ABLIM1O14639 778 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PRRG1O14668 218 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SLC16A4O15374 487 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SLC26A4O43511 780 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MICAL2O94851 1124 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 RHOP08100 348 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PLS3P13797 630 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ATF2P15336 505 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ATP2C1P98194 919 aaPredicted RBP19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZNF280DQ6N043 979 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZPBP2Q6X784 338 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ELMOD1Q8N336 334 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 APPL2Q8NEU8 664 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CDK5RAP3Q96JB5 506 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KIF2CQ99661 725 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 RPP25Q9BUL9 199 aaKnown RBP19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 BCO2Q9BYV7 579 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 WDR27A2RRH5 827 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZNF197O14709 1029 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SNW1Q13573 536 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MRPL58Q14197 206 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 RABEP1Q15276 862 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KYAT1Q16773 422 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SLC44A4Q53GD3 710 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ARL6IP4Q66PJ3 421 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MCTP1Q6DN14 999 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SYT2Q8N9I0 419 aaPredicted RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KCNG4Q8TDN1 519 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SUSD3Q96L08 255 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZMAT2Q96NC0 199 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 NELL2Q99435 816 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KXD1Q9BQD3 176 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MMTAG2Q9BU76 263 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 OXCT2Q9BYC2 517 aaPredicted RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 FOXQ1Q9C009 403 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PLEKHA5Q9HAU0 1116 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 LARSQ9P2J5 1176 aaKnown RBP19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ANKFY1Q9P2R3 1169 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PATJQ8NI35 1801 aa19.11■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 NCAM2O15394 837 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CLDN3O15551 220 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TBC1D4O60343 1298 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 SP9P0CG40 484 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 HARSP12081 509 aaKnown RBP19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MCM4P33991 863 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 IL17AQ16552 155 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZNF528Q3MIS6 628 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KCNK18Q7Z418 384 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 LEMD2Q8NC56 503 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 KCNN1Q92952 543 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ELSPBP1Q96BH3 223 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CYP4F11Q9HBI6 524 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 DMDP11532 3685 aa19.1■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 XPOTO43592 962 aaKnown RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MAPTP10636 758 aaKnown RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 IGFBP6P24592 240 aaPredicted RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CDC25AP30304 524 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MCL1Q07820 350 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ZRSR1Q15695 479 aaKnown RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 CTXN3Q4LDR2 81 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ERMP1Q7Z2K6 904 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 ING5Q8WYH8 240 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 DNASE1L2Q92874 299 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 AK8Q96MA6 479 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 TSPAN18Q96SJ8 248 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 AFF4Q9UHB7 1163 aaKnown RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 FBXL5Q9UKA1 691 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 FBXO4Q9UKT5 387 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 PCDHB8Q9UN66 801 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 MRPS17Q9Y2R5 130 aaKnown RBP19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 INSL5Q9Y5Q6 135 aa19.09■□□□□ 0.65
CKLF-CMTM1-202ENST00000527845 H3BQV1 296 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms