RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ARHGEF37A1IGU5 675 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 K7ERI5 159 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 IGFBP6P24592 240 aaPredicted RBP15.65■□□□□ 0.1
VARS-228ENST00000495010 IQCEQ6IPM2 695 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 SLC8B1Q6J4K2 584 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 FAM3CQ92520 227 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 IER2Q9BTL4 223 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 KIFC3Q9BVG8 833 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 TMEM60Q9H2L4 133 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 NUB1Q9Y5A7 615 aa15.65■□□□□ 0.1
VARS-228ENST00000495010 WDR27A2RRH5 827 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 DCDC2BA2VCK2 349 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 PODXLO00592 558 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 WNT7AO00755 349 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 MICAL2O94851 1124 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 ABLIM3O94929 683 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 EDN1P05305 212 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 ATF2P15336 505 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 RPA1P27694 616 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 GDI1P31150 447 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 CCR3P51677 355 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 OSTNP61366 133 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 FZD5Q13467 585 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
VARS-228ENST00000495010 LPAL2Q16609 132 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 FAM78AQ5JUQ0 283 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 NT5DC1Q5TFE4 455 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 HAUS3Q68CZ6 603 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 PRR23BQ6ZRT6 265 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 CELF5Q8N6W0 485 aaKnown RBP15.64■□□□□ 0.09
VARS-228ENST00000495010 C3orf58Q8NDZ4 430 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 KIFAP3Q92845 792 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 TCEAL4Q96EI5 215 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 ZNF512Q96ME7 567 aaPredicted RBP15.64■□□□□ 0.09
VARS-228ENST00000495010 CHRDQ9H2X0 955 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 LMAN1LQ9HAT1 526 aa15.64■□□□□ 0.09
VARS-228ENST00000495010 NOTCH4Q99466 2003 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 CEP250Q9BV73 2442 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 CCDC169A6NNP5 214 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 SYN3O14994 580 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 PSMC3P17980 439 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 GRM5P41594 1212 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 SPEM2Q0P670 501 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 ZNF568Q3ZCX4 644 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 CTXN3Q4LDR2 81 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 PRSS36Q5K4E3 855 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 TPGS2Q68CL5 300 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 LAIR1Q6GTX8 287 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 CD300LGQ6UXG3 332 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 TCEAL8Q8IYN2 117 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 SMARCD2Q92925 531 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 GTF3C6Q969F1 213 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 TCHPQ9BT92 498 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 ZNF334Q9HCZ1 680 aaPredicted RBP15.63■□□□□ 0.09
VARS-228ENST00000495010 TNFSF13BQ9Y275 285 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 INSL5Q9Y5Q6 135 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 PIAS3Q9Y6X2 628 aa15.63■□□□□ 0.09
VARS-228ENST00000495010 DMXL1Q9Y485 3027 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 ZNF263O14978 683 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 OR52Z1P0C646 297 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 MYL4P12829 197 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 MUTP22033 750 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 FCARP24071 287 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 CCT6AP40227 531 aaKnown RBP15.62■□□□□ 0.09
VARS-228ENST00000495010 YAF2Q8IY57 180 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 LEMD2Q8NC56 503 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 NSUN7Q8NE18 718 aaKnown RBP15.62■□□□□ 0.09
VARS-228ENST00000495010 CSGALNACT1Q8TDX6 532 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 DEPDC1BQ8WUY9 529 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 ASB16Q96NS5 453 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 BHMT2Q9H2M3 363 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 SLITRK6Q9H5Y7 841 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 FBXL5Q9UKA1 691 aa15.62■□□□□ 0.09
VARS-228ENST00000495010 WDR87Q6ZQQ6 2873 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 GPR179Q6PRD1 2367 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 KRT37O76014 449 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 SEC24AO95486 1093 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 MARCKSP29966 332 aaPredicted RBP15.61■□□□□ 0.09
VARS-228ENST00000495010 RPL9P32969 192 aaKnown RBP15.61■□□□□ 0.09
VARS-228ENST00000495010 MCM4P33991 863 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 CXCL12P48061 93 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 SOX4Q06945 474 aaPredicted RBP15.61■□□□□ 0.09
VARS-228ENST00000495010 TWF1Q12792 350 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ZNF174Q15697 407 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ME3Q16798 604 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ZNF280DQ6N043 979 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 POTEHQ6S545 545 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 VITQ6UXI7 678 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 MAMSTRQ6ZN01 415 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 CEP120Q8N960 986 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 APPL2Q8NEU8 664 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ACAP3Q96P50 834 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ACO2Q99798 780 aaKnown RBP15.61■□□□□ 0.09
VARS-228ENST00000495010 MRPL4Q9BYD3 311 aaKnown RBP15.61■□□□□ 0.09
VARS-228ENST00000495010 PARD6AQ9NPB6 346 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 TRPV5Q9NQA5 729 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 ASAH2Q9NR71 780 aa15.61■□□□□ 0.09
VARS-228ENST00000495010 MAFFQ9ULX9 164 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms