RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 TBC1D17Q9HA65 648 aa9.06□□□□□ -0.96
APP-216ENST00000491395 UPF2Q9HAU5 1272 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 DNMT3BQ9UBC3 853 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
APP-216ENST00000491395 NUB1Q9Y5A7 615 aa9.06□□□□□ -0.96
APP-216ENST00000491395 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
APP-216ENST00000491395 WDR27A2RRH5 827 aa9.05□□□□□ -0.96
APP-216ENST00000491395 CLDN3O15551 220 aa9.05□□□□□ -0.96
APP-216ENST00000491395 TBC1D4O60343 1298 aa9.05□□□□□ -0.96
APP-216ENST00000491395 ABLIM3O94929 683 aa9.05□□□□□ -0.96
APP-216ENST00000491395 SEC24AO95486 1093 aa9.05□□□□□ -0.96
APP-216ENST00000491395 POU2F2P09086 479 aa9.05□□□□□ -0.96
APP-216ENST00000491395 CLTAP09496 248 aa9.05□□□□□ -0.96
APP-216ENST00000491395 RFX1P22670 979 aa9.05□□□□□ -0.96
APP-216ENST00000491395 UBA7P41226 1012 aa9.05□□□□□ -0.96
APP-216ENST00000491395 MATR3P43243 847 aaKnown RBP eCLIP9.05□□□□□ -0.96
APP-216ENST00000491395 MCM2P49736 904 aa9.05□□□□□ -0.96
APP-216ENST00000491395 GPC5P78333 572 aa9.05□□□□□ -0.96
APP-216ENST00000491395 MCL1Q07820 350 aa9.05□□□□□ -0.96
APP-216ENST00000491395 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
APP-216ENST00000491395 MCM6Q14566 821 aa9.05□□□□□ -0.96
APP-216ENST00000491395 NOLC1Q14978 699 aaKnown RBP eCLIP9.05□□□□□ -0.963e-11■□□□□ 10.2
APP-216ENST00000491395 PABPC1LQ4VXU2 614 aaKnown RBP9.05□□□□□ -0.96
APP-216ENST00000491395 SLC8B1Q6J4K2 584 aa9.05□□□□□ -0.96
APP-216ENST00000491395 POTEHQ6S545 545 aa9.05□□□□□ -0.96
APP-216ENST00000491395 ZPBP2Q6X784 338 aa9.05□□□□□ -0.96
APP-216ENST00000491395 HAUS6Q7Z4H7 955 aa9.05□□□□□ -0.96
APP-216ENST00000491395 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
APP-216ENST00000491395 GPBP1Q86WP2 473 aa9.05□□□□□ -0.96
APP-216ENST00000491395 CCDC105Q8IYK2 499 aa9.05□□□□□ -0.96
APP-216ENST00000491395 ING5Q8WYH8 240 aa9.05□□□□□ -0.96
APP-216ENST00000491395 AK8Q96MA6 479 aa9.05□□□□□ -0.96
APP-216ENST00000491395 TBC1D32Q96NH3 1257 aa9.05□□□□□ -0.96
APP-216ENST00000491395 REEP2Q9BRK0 252 aa9.05□□□□□ -0.96
APP-216ENST00000491395 ARHGEF3Q9NR81 526 aa9.05□□□□□ -0.96
APP-216ENST00000491395 KCND2Q9NZV8 630 aa9.05□□□□□ -0.96
APP-216ENST00000491395 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
APP-216ENST00000491395 TUBGCP4Q9UGJ1 667 aa9.05□□□□□ -0.96
APP-216ENST00000491395 FBXL5Q9UKA1 691 aa9.05□□□□□ -0.96
APP-216ENST00000491395 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.05□□□□□ -0.96
APP-216ENST00000491395 ZFP37Q9Y6Q3 630 aaPredicted RBP9.05□□□□□ -0.96
APP-216ENST00000491395 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ARHGEF37A1IGU5 675 aa9.04□□□□□ -0.96
APP-216ENST00000491395 PROB1E7EW31 1015 aa9.04□□□□□ -0.96
APP-216ENST00000491395 H7C4K7 107 aa9.04□□□□□ -0.96
APP-216ENST00000491395 SYN3O14994 580 aa9.04□□□□□ -0.96
APP-216ENST00000491395 SLC26A4O43511 780 aa9.04□□□□□ -0.96
APP-216ENST00000491395 RHOP08100 348 aa9.04□□□□□ -0.96
APP-216ENST00000491395 CXCL8P10145 99 aa9.04□□□□□ -0.96
APP-216ENST00000491395 PTPN2P17706 415 aa9.04□□□□□ -0.96
APP-216ENST00000491395 PLCG1P19174 1290 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ELF1P32519 619 aa9.04□□□□□ -0.96
APP-216ENST00000491395 MCM4P33991 863 aa9.04□□□□□ -0.96
APP-216ENST00000491395 NBL1P41271 181 aa9.04□□□□□ -0.96
APP-216ENST00000491395 TNFSF9P41273 254 aa9.04□□□□□ -0.96
APP-216ENST00000491395 NCKAP1LP55160 1127 aa9.04□□□□□ -0.96
APP-216ENST00000491395 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
APP-216ENST00000491395 ANGPT1Q15389 498 aa9.04□□□□□ -0.96
APP-216ENST00000491395 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
APP-216ENST00000491395 SLC5A9Q2M3M2 681 aa9.04□□□□□ -0.96
APP-216ENST00000491395 CTXN3Q4LDR2 81 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ZBTB41Q5SVQ8 909 aa9.04□□□□□ -0.96
APP-216ENST00000491395 RTL10Q7L3V2 364 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ASCL5Q7RTU5 278 aa9.04□□□□□ -0.96
APP-216ENST00000491395 NPAS3Q8IXF0 933 aa9.04□□□□□ -0.96
APP-216ENST00000491395 TCEAL8Q8IYN2 117 aa9.04□□□□□ -0.96
APP-216ENST00000491395 MYCT1Q8N699 235 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ZNF461Q8TAF7 563 aa9.04□□□□□ -0.96
APP-216ENST00000491395 MCRS1Q96EZ8 462 aa9.04□□□□□ -0.96
APP-216ENST00000491395 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
APP-216ENST00000491395 BICD1Q96G01 975 aa9.04□□□□□ -0.96
APP-216ENST00000491395 CALML4Q96GE6 196 aa9.04□□□□□ -0.96
APP-216ENST00000491395 SUSD3Q96L08 255 aa9.04□□□□□ -0.96
APP-216ENST00000491395 KXD1Q9BQD3 176 aa9.04□□□□□ -0.96
APP-216ENST00000491395 CYP4F11Q9HBI6 524 aa9.04□□□□□ -0.96
APP-216ENST00000491395 SLC2A4RGQ9NR83 387 aa9.04□□□□□ -0.96
APP-216ENST00000491395 BLOC1S4Q9NUP1 217 aa9.04□□□□□ -0.96
APP-216ENST00000491395 KCNH3Q9ULD8 1083 aa9.04□□□□□ -0.96
APP-216ENST00000491395 ODF2LQ9ULJ1 636 aa9.04□□□□□ -0.96
APP-216ENST00000491395 TBX20Q9UMR3 447 aa9.04□□□□□ -0.96
APP-216ENST00000491395 MRPS23Q9Y3D9 190 aaKnown RBP9.04□□□□□ -0.96
APP-216ENST00000491395 TIMM13Q9Y5L4 95 aaPredicted RBP9.04□□□□□ -0.96
APP-216ENST00000491395 DENND4AQ7Z401 1863 aa9.03□□□□□ -0.96
APP-216ENST00000491395 KMT2EQ8IZD2 1858 aa9.03□□□□□ -0.96
APP-216ENST00000491395 TTC26A0AVF1 554 aa9.03□□□□□ -0.96
APP-216ENST00000491395 LACTBL1A8MY62 500 aa9.03□□□□□ -0.96
APP-216ENST00000491395 H0YCG3 227 aa9.03□□□□□ -0.96
APP-216ENST00000491395 K7ENM7 598 aa9.03□□□□□ -0.96
APP-216ENST00000491395 NRG2O14511 850 aaPredicted RBP9.03□□□□□ -0.96
APP-216ENST00000491395 PRRG1O14668 218 aa9.03□□□□□ -0.96
APP-216ENST00000491395 LRRN2O75325 713 aa9.03□□□□□ -0.96
APP-216ENST00000491395 FAM13AO94988 1023 aa9.03□□□□□ -0.96
APP-216ENST00000491395 LRG1P02750 347 aa9.03□□□□□ -0.96
APP-216ENST00000491395 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
APP-216ENST00000491395 DCNP07585 359 aaKnown RBP9.03□□□□□ -0.96
APP-216ENST00000491395 ATF2P15336 505 aa9.03□□□□□ -0.96
APP-216ENST00000491395 CEBPBP17676 345 aa9.03□□□□□ -0.96
APP-216ENST00000491395 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
APP-216ENST00000491395 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
APP-216ENST00000491395 LONP1P36776 959 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms