RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 TBC1D17Q9HA65 648 aa21.31■■□□□ 1
R3HDM1-215ENST00000483021 ARHGEF3Q9NR81 526 aa21.31■■□□□ 1
R3HDM1-215ENST00000483021 LARSQ9P2J5 1176 aaKnown RBP21.31■■□□□ 1
R3HDM1-215ENST00000483021 ANKFY1Q9P2R3 1169 aa21.31■■□□□ 1
R3HDM1-215ENST00000483021 NUB1Q9Y5A7 615 aa21.31■■□□□ 1
R3HDM1-215ENST00000483021 FAM186AA6NE01 2351 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 MIA3Q5JRA6 1907 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 WDR87Q6ZQQ6 2873 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 I3L4J1 428 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 PLA2G4BP0C869 781 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 MAPTP10636 758 aaKnown RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 IGFBP6P24592 240 aaPredicted RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 PABPC1LQ4VXU2 614 aaKnown RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 VARS2Q5ST30 1063 aaKnown RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 PHLDB3Q6NSJ2 640 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 RSPO2Q6UXX9 243 aaPredicted RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 FGF14Q92915 247 aa21.3■■□□□ 1
R3HDM1-215ENST00000483021 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.3■■□□□ 1
R3HDM1-215ENST00000483021 H7C4K7 107 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 ROR1Q01973 937 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 ANGPT1Q15389 498 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 TMEM119Q4V9L6 283 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 ZNF461Q8TAF7 563 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 SMC3Q9UQE7 1217 aa21.29■■□□□ 1
R3HDM1-215ENST00000483021 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.29■■□□□ 1
R3HDM1-215ENST00000483021 CLDN3O15551 220 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 LRG1P02750 347 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 SCP2P22307 547 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 ELF1P32519 619 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 MCL1Q07820 350 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 PARM1Q6UWI2 310 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 ITFG1Q8TB96 612 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 KCNN1Q92952 543 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 CALML4Q96GE6 196 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 SHDQ96IW2 340 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 ZBTB45Q96K62 511 aaPredicted RBP21.28■■□□□ 1
R3HDM1-215ENST00000483021 PLIN2Q99541 437 aa21.28■■□□□ 1
R3HDM1-215ENST00000483021 DNMT3BQ9UBC3 853 aaKnown RBP21.28■■□□□ 1
R3HDM1-215ENST00000483021 PTPRZ1P23471 2315 aaPredicted RBP21.28■■□□□ 1
R3HDM1-215ENST00000483021 ARHGEF37A1IGU5 675 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 PRR23AA6NEV1 266 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 ABLIM3O94929 683 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 CD2BP2O95400 341 aaKnown RBP21.27■■□□□ 1
R3HDM1-215ENST00000483021 BMP15O95972 392 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 MATR3P43243 847 aaKnown RBP eCLIP21.27■■□□□ 14e-9■■■□□ 17.6
R3HDM1-215ENST00000483021 NCKAP1LP55160 1127 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 NPAS3Q8IXF0 933 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 NKD2Q969F2 451 aaPredicted RBP21.27■■□□□ 1
R3HDM1-215ENST00000483021 C18orf25Q96B23 403 aaPredicted RBP21.27■■□□□ 1
R3HDM1-215ENST00000483021 BICD1Q96G01 975 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 SUSD3Q96L08 255 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 AVENQ9NQS1 362 aaPredicted RBP21.27■■□□□ 1
R3HDM1-215ENST00000483021 HCFC1R1Q9NWW0 138 aa21.27■■□□□ 1
R3HDM1-215ENST00000483021 MRPS23Q9Y3D9 190 aaKnown RBP21.27■■□□□ 1
R3HDM1-215ENST00000483021 WDR27A2RRH5 827 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 PRRG1O14668 218 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 TBC1D4O60343 1298 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 ATF2P15336 505 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 MCM4P33991 863 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 UBA7P41226 1012 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 KYAT1Q16773 422 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 SLC10A6Q3KNW5 377 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 TPGS2Q68CL5 300 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 ZNF280DQ6N043 979 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 FRMD5Q7Z6J6 570 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 APPL2Q8NEU8 664 aa21.26■□□□□ 0.99
R3HDM1-215ENST00000483021 SPTBN4Q9H254 2564 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 MEFVO15553 781 aaPredicted RBP21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 CLTAP09496 248 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 PFKPQ01813 784 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 MRPL58Q14197 206 aaKnown RBP21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 CTXN3Q4LDR2 81 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 LARP1BQ659C4 914 aaKnown RBP21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 ASCL5Q7RTU5 278 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 HAUS6Q7Z4H7 955 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 BRAPQ7Z569 592 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 TCEAL8Q8IYN2 117 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 ST13P5Q8NFI4 369 aaPredicted RBP21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 RPP25Q9BUL9 199 aaKnown RBP21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 GDE1Q9NZC3 331 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 FBXL5Q9UKA1 691 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 MAFFQ9ULX9 164 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 SIT1Q9Y3P8 196 aa21.25■□□□□ 0.99
R3HDM1-215ENST00000483021 RHOP08100 348 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 CXCL8P10145 99 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 PTPN2P17706 415 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 ABCD1P33897 745 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 LIG4P49917 911 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 ARPP19P56211 112 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 STARD6P59095 220 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 GPC5P78333 572 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 CACNB1Q02641 598 aaPredicted RBP21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 PRKCQQ04759 706 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 PPP2R3AQ06190 1150 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 SEZ6Q53EL9 994 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 ARSHQ5FYA8 562 aa21.24■□□□□ 0.99
R3HDM1-215ENST00000483021 GPBP1Q86WP2 473 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms