RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 KCNK18Q7Z418 384 aa6.4□□□□□ -1.38
PRKD3-208ENST00000475912 ATL2Q8NHH9 583 aa6.4□□□□□ -1.38
PRKD3-208ENST00000475912 CEP95Q96GE4 821 aa6.4□□□□□ -1.38
PRKD3-208ENST00000475912 NDC1Q9BTX1 674 aa6.4□□□□□ -1.38
PRKD3-208ENST00000475912 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
PRKD3-208ENST00000475912 EIF2B4Q9UI10 523 aaKnown RBP6.4□□□□□ -1.38
PRKD3-208ENST00000475912 ABCC5O15440 1437 aa6.4□□□□□ -1.39
PRKD3-208ENST00000475912 MYOM3Q5VTT5 1437 aa6.4□□□□□ -1.39
PRKD3-208ENST00000475912 NRXN3Q9Y4C0 1643 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 CROCC2H7BZ55 1655 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 SPHKAPQ2M3C7 1700 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 NALCNQ8IZF0 1738 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 CEP350Q5VT06 3117 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 AKR1B10O60218 316 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 GASTP01350 101 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 APOBEC3AP31941 199 aaPredicted RBP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 GPR3P46089 330 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 FAPQ12884 760 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 MST1LQ2TV78 715 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 ZNF627Q7L945 461 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 GPRIN1Q7Z2K8 1008 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 AMER2Q8N7J2 671 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 REPS2Q8NFH8 660 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 ACE2Q9BYF1 805 aaPredicted RBP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 ZNF768Q9H5H4 540 aaKnown RBP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 CCM2LQ9NUG4 571 aaPredicted RBP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 METP08581 1390 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 RPRD2Q5VT52 1461 aaKnown RBP6.39□□□□□ -1.39
PRKD3-208ENST00000475912 SLIT2O94813 1529 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
PRKD3-208ENST00000475912 TRIM24O15164 1050 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 PHF2O75151 1096 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 RECQL4O94761 1208 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 MTHFD2P13995 350 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 CRHR1P34998 444 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 PTGS2P35354 604 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 TGFB2P61812 414 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 MFSD14BQ5SR56 506 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 RNF219Q5W0B1 726 aaPredicted RBP6.38□□□□□ -1.39
PRKD3-208ENST00000475912 PDZD4Q76G19 769 aaPredicted RBP6.38□□□□□ -1.39
PRKD3-208ENST00000475912 RNF169Q8NCN4 708 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 GPR156Q8NFN8 814 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 FBXO18Q8NFZ0 1043 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 HAS1Q92839 578 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
PRKD3-208ENST00000475912 KCNH6Q9H252 994 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 DMRT3Q9NQL9 472 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 DNAJC28Q9NX36 388 aa6.38□□□□□ -1.39
PRKD3-208ENST00000475912 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.38□□□□□ -1.39
PRKD3-208ENST00000475912 AHRRA9YTQ3 701 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 B5MCH6 92 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 LEFTY2O00292 366 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 OSMP13725 252 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 PTPN7P35236 360 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 ERVK-21P61565 698 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 Q6ZVL8 140 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 MRGPREQ86SM8 312 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 SYT12Q8IV01 421 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 UNC5CLQ8IV45 518 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 TRMT2AQ8IZ69 625 aaKnown RBP6.37□□□□□ -1.39
PRKD3-208ENST00000475912 OR10H5Q8NGA6 315 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 FATE1Q969F0 183 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 CHFRQ96EP1 664 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 GREM2Q9H772 168 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 SCOCQ9UIL1 159 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
PRKD3-208ENST00000475912 PXDNQ92626 1479 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 DAPK1P53355 1430 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 TBKBP1A7MCY6 615 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 ZFP36P26651 326 aaKnown RBP6.36□□□□□ -1.39
PRKD3-208ENST00000475912 DPTQ07507 201 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 MUM1L1Q5H9M0 696 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 KRT27Q7Z3Y8 459 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 LDLRAD3Q86YD5 345 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 SYNE4Q8N205 404 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 OR7D4Q8NG98 312 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 LENG9Q96B70 501 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 IKZF4Q9H2S9 585 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 TRPM5Q9NZQ8 1165 aa6.36□□□□□ -1.39
PRKD3-208ENST00000475912 MARF1Q9Y4F3 1742 aaKnown RBP6.36□□□□□ -1.39
PRKD3-208ENST00000475912 WASHC2AQ641Q2 1341 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 WNT10BO00744 389 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 ECHS1P30084 290 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 MTNR1BP49286 362 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 FLT3LGP49771 235 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
PRKD3-208ENST00000475912 FAM189BP81408 668 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 NHLH2Q02577 135 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 PPP3CAQ08209 521 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 BMT2Q1RMZ1 405 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 EFCAB12Q6NXP0 572 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 DRICH1Q6PGQ1 229 aaPredicted RBP6.35□□□□□ -1.39
PRKD3-208ENST00000475912 Q6ZPA2 131 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 RHOUQ7L0Q8 258 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRKD3-208ENST00000475912 SLC35B2Q8TB61 432 aa6.35□□□□□ -1.39
PRKD3-208ENST00000475912 UHRF1Q96T88 793 aaPredicted RBP6.35□□□□□ -1.39
PRKD3-208ENST00000475912 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms