RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 CLCNKBP51801 687 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CREMQ03060 361 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ENPEPQ07075 957 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CYP24A1Q07973 514 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CETN1Q12798 172 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 MYO1EQ12965 1108 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 BIRC3Q13489 604 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 TRPC3Q13507 836 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SMC1AQ14683 1233 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 PSMD6Q15008 389 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SV2CQ496J9 727 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SPATA1Q5VX52 437 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 JADE1Q6IE81 842 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ALKAL1Q6UXT8 129 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 LRRC55Q6ZSA7 311 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DDX53Q86TM3 631 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF280BQ86YH2 543 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CBWD2Q8IUF1 395 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CREBRFQ8IUR6 639 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 FAM186BQ8IYM0 893 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 GSTCDQ8NEC7 633 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ANKRD20A12PQ8NF67 263 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 GDPD5Q8WTR4 605 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CEP63Q96MT8 703 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CGRRF1Q99675 332 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DNAI2Q9GZS0 605 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 HAPLN2Q9GZV7 340 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 PRDM12Q9H4Q4 367 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 NGRNQ9NPE2 291 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 MIOSQ9NXC5 875 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DPP3Q9NY33 737 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 MAGEC2Q9UBF1 373 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DNAJB4Q9UDY4 337 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ARMCX3Q9UH62 379 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 RWDD2AQ9UIY3 292 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ITGA11Q9UKX5 1188 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 PLAGL2Q9UPG8 496 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 PRRC2BQ5JSZ5 2229 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 MYO7AQ13402 2215 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 NT5C1B-RDH14C9J2C7 533 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 IKBKBO14920 756 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 NCK2O43639 380 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 CAVIN2O95810 425 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 SOD2P04179 222 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ITGB1P05556 798 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ADRB2P07550 413 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 NFICP08651 508 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ODC1P11926 461 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 P4HA1P13674 534 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 PRKCSHP14314 528 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 LRPAP1P30533 357 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 PBX3P40426 434 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 GLUD2P49448 558 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TAF6P49848 677 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 VAMP7P51809 220 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 AFF1P51825 1210 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TPM4P67936 248 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 RBP5P82980 135 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 SPAG1Q07617 926 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 BFSP1Q12934 665 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 UPP1Q16831 310 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 USP41Q3LFD5 358 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ZCWPW2Q504Y3 356 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 DCAF17Q5H9S7 520 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ZBTB41Q5SVQ8 909 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ANKRD40Q6AI12 368 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 FUT10Q6P4F1 479 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 CRELD2Q6UXH1 353 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 DSTYKQ6XUX3 929 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 RBM43Q6ZSC3 357 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 METTL23Q86XA0 190 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 VPS52Q8N1B4 723 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 APPL2Q8NEU8 664 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 POF1BQ8WVV4 589 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 MRPL38Q96DV4 380 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 MFSD14AQ96MC6 490 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ZMAT2Q96NC0 199 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TCF25Q9BQ70 676 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ANP32EQ9BTT0 268 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 EMILIN2Q9BXX0 1053 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 IKZF4Q9H2S9 585 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TTYH1Q9H313 450 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 PDE11AQ9HCR9 933 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 MRPL17Q9NRX2 175 aaKnown RBP6.89□□□□□ -1.31
SF3B1-206ENST00000462613 INTS13Q9NVM9 706 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 DMAC2Q9NW81 257 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TUBGCP4Q9UGJ1 667 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 DPP7Q9UHL4 492 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 DSEQ9UL01 958 aa6.89□□□□□ -1.31
SF3B1-206ENST00000462613 TSC2P49815 1807 aa6.88□□□□□ -1.31
SF3B1-206ENST00000462613 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms