RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
HCFC1-204ENST00000461098 CORO1BQ9BR76 489 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-204ENST00000461098 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 ATRXP46100 2492 aa13.1□□□□□ -0.31
HCFC1-204ENST00000461098 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 ATF2P15336 505 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 PSMC3P17980 439 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 CCNE1P24864 410 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 GDI1P31150 447 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 BRCC3P46736 316 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-204ENST00000461098 PTGDRQ13258 359 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 PDCD11Q14690 1871 aaKnown RBP13.09□□□□□ -0.31
HCFC1-204ENST00000461098 EEF1DP3Q658K8 133 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
HCFC1-204ENST00000461098 BSNDQ8WZ55 320 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
HCFC1-204ENST00000461098 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 TRPV4Q9HBA0 871 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 GOLGA2P5Q9HBQ8 144 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 RBM12Q9NTZ6 932 aaKnown RBP13.09□□□□□ -0.31
HCFC1-204ENST00000461098 GREB1Q4ZG55 1949 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 FAM208BQ5VWN6 2430 aa13.09□□□□□ -0.31
HCFC1-204ENST00000461098 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 LRRIQ4A6NIV6 560 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 N4BP3O15049 544 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 CNR2P34972 360 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 LIMK1P53667 647 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 SOX4Q06945 474 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 Q6ZS52 159 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 MAEAQ7L5Y9 396 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 LONP2Q86WA8 852 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
HCFC1-204ENST00000461098 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 CEP72Q9P209 647 aa13.08□□□□□ -0.32
HCFC1-204ENST00000461098 ZNF197O14709 1029 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 DTNBO60941 627 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 CDC45O75419 566 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 LRG1P02750 347 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
HCFC1-204ENST00000461098 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
HCFC1-204ENST00000461098 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 DEPDC1BQ8WUY9 529 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-204ENST00000461098 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
HCFC1-204ENST00000461098 ACKR2O00590 384 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 WNT7AO00755 349 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 PRRG1O14668 218 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 ZNF263O14978 683 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 MARCH6O60337 910 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 FOXD2O60548 495 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 GJA1P17302 382 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 HOXA6P31267 233 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 SOX9P48436 509 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 EPHA5P54756 1037 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 XKR4Q5GH76 650 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 HEATR6Q6AI08 1181 aaKnown RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 PDZD4Q76G19 769 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 ZSCAN18Q8TBC5 510 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 UROC1Q96N76 676 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 NAP1L4Q99733 375 aaKnown RBP13.06□□□□□ -0.32
HCFC1-204ENST00000461098 CYP4F11Q9HBI6 524 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 ZSWIM6Q9HCJ5 1215 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 PCDHA12Q9UN75 941 aa13.06□□□□□ -0.32
HCFC1-204ENST00000461098 SDK1Q7Z5N4 2213 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 LAMA5O15230 3695 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 SMIM28A0A1B0GU29 152 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 CPLX1O14810 134 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
HCFC1-204ENST00000461098 PRKCBP05771 671 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 KCNA4P22459 653 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 PSMA5P28066 241 aa13.05□□□□□ -0.32
HCFC1-204ENST00000461098 ELF1P32519 619 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms