RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CCSER1Q9C0I3 900 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 HAPLN2Q9GZV7 340 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 IKZF4Q9H2S9 585 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PTPRHQ9HD43 1115 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 MRPL17Q9NRX2 175 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 ANKFY1Q9P2R3 1169 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PRKAG3Q9UGI9 489 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RAPGEFL1Q9UHV5 662 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 ADAM28Q9UKQ2 775 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RBM19Q9Y4C8 960 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SRPRBQ9Y5M8 271 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 IRAK3Q9Y616 596 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PLXNA3P51805 1871 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZMYM2Q9UBW7 1377 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TECTAO75443 2155 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 VWA8A3KMH1 1905 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 MYO10Q9HD67 2058 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SMIM28A0A1B0GU29 152 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 FSD2A1L4K1 749 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TISP43B9A030 160 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 I3L4J1 428 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TEX28O15482 410 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC26A4O43511 780 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TBCAO75347 108 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TADA2AO75478 443 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 MCF2P10911 925 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PROZP22891 400 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 NMT1P30419 496 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 MATR3P43243 847 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 NASPP49321 788 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CLCN4P51793 760 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF131P52739 623 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SMTNP53814 917 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 NCKAP1LP55160 1127 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 DSG1Q02413 1049 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SPAG1Q07617 926 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CBX2Q14781 532 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 STK38Q15208 465 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TPRNQ4KMQ1 711 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZC2HC1CQ53FD0 456 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 RTP2Q5QGT7 225 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZBTB41Q5SVQ8 909 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM171A1Q5VUB5 890 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 KIAA0319Q5VV43 1072 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 KIAA1841Q6NSI8 718 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMC5Q6UXY8 1006 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CEP57Q86XR8 500 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PALB2Q86YC2 1186 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 RNF135Q8IUD6 432 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PDILTQ8N807 584 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 KRI1Q8N9T8 703 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 C3orf58Q8NDZ4 430 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 C18orf25Q96B23 403 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SNX27Q96L92 541 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 FBXL18Q96ME1 805 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZMAT2Q96NC0 199 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PPP1R10Q96QC0 940 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 FIZ1Q96SL8 496 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 NTPCRQ9BSD7 190 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CCDC94Q9BW85 323 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PHF7Q9BWX1 381 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZSCAN16Q9H4T2 348 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 POMKQ9H5K3 350 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 C17orf75Q9HAS0 396 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 KCND2Q9NZV8 630 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 LARSQ9P2J5 1176 aaKnown RBP6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 CCDC39Q9UFE4 941 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 MUTYHQ9UIF7 546 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 ODF2LQ9ULJ1 636 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 DOCK6Q96HP0 2047 aa6.31□□□□□ -1.4
HMGB1P20-201ENST00000402555 SF3B1O75533 1304 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 C2orf16Q68DN1 1984 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 MYMKA6NI61 221 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 LOC730098B7Z3J9 87 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ANKRD63C9JTQ0 380 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 PI4K2BG5E9Z4 385 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 SPTLC2O15270 562 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CLDN3O15551 220 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ADAM12O43184 909 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 DCXO43602 365 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TRAK2O60296 914 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TOM1L1O75674 476 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZMYND10O75800 440 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 BRD1O95696 1058 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 F13A1P00488 732 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ADH1AP07327 375 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 CXCL8P10145 99 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 HOXB8P17481 243 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 DDIT3P35638 169 aa6.3□□□□□ -1.4
HMGB1P20-201ENST00000402555 TXLNAP40222 546 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms