RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ENOX2Q16206 610 aaKnown RBP18.62■□□□□ 0.57
BRCC3-202ENST00000340647 POTEHQ6S545 545 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 CCDC149Q6ZUS6 474 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 SMG7Q92540 1137 aaKnown RBP18.62■□□□□ 0.57
BRCC3-202ENST00000340647 PBXIP1Q96AQ6 731 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 ZDHHC7Q9NXF8 308 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 CFAP54Q96N23 3096 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 CLUHO75153 1309 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 A0A0B4J269 797 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 K7ENM7 598 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 VCPP55072 806 aaKnown RBP18.61■□□□□ 0.57
BRCC3-202ENST00000340647 NTHL1P78549 312 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 CREMQ03060 361 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 DYMQ7RTS9 669 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 MAP4K3Q8IVH8 894 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 FGFBP2Q9BYJ0 223 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 ST6GALNAC4Q9H4F1 302 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 BACE2Q9Y5Z0 518 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 CDY1Q9Y6F8 540 aa18.61■□□□□ 0.57
BRCC3-202ENST00000340647 LACTBL1A8MY62 500 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 RPL9P32969 192 aaKnown RBP18.6■□□□□ 0.57
BRCC3-202ENST00000340647 GUCY2FP51841 1108 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 KCNA1Q09470 495 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 VARS2Q5ST30 1063 aaKnown RBP18.6■□□□□ 0.57
BRCC3-202ENST00000340647 OTOP3Q7RTS5 596 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 SFR1Q86XK3 245 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 RSAD2Q8WXG1 361 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 DDX12PQ92771 950 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 PANK2Q9BZ23 570 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 ZSCAN16Q9H4T2 348 aaPredicted RBP18.6■□□□□ 0.57
BRCC3-202ENST00000340647 KCNK12Q9HB15 430 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 SLC38A7Q9NVC3 462 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 STK17AQ9UEE5 414 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 CPSF3Q9UKF6 684 aaKnown RBP18.6■□□□□ 0.57
BRCC3-202ENST00000340647 STYXL1Q9Y6J8 313 aa18.6■□□□□ 0.57
BRCC3-202ENST00000340647 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 H0YCG3 227 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 PPEF2O14830 753 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 C8AP07357 584 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 CLTAP09496 248 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 ADSSP30520 456 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 LRPAP1P30533 357 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 MTMR3Q13615 1198 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 PKP1Q13835 747 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 SLC8B1Q6J4K2 584 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 FBXL6Q8N531 539 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 ZSWIM2Q8NEG5 633 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 SUSD3Q96L08 255 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 PLEKHA5Q9HAU0 1116 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 TFIP11Q9UBB9 837 aaKnown RBP18.59■□□□□ 0.57
BRCC3-202ENST00000340647 EPS15L1Q9UBC2 864 aa18.59■□□□□ 0.57
BRCC3-202ENST00000340647 MYO15AQ9UKN7 3530 aa18.58■□□□□ 0.57
BRCC3-202ENST00000340647 FRMD3A2A2Y4 597 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 WDR27A2RRH5 827 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 HNRNPDLO14979 420 aaKnown RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 OGTO15294 1046 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 NARSO43776 548 aaKnown RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 ABLIM3O94929 683 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 AARSP49588 968 aaKnown RBP eCLIP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 LIG4P49917 911 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 CASP5P51878 434 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 ROR1Q01973 937 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 TCF15Q12870 199 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 E2F4Q16254 413 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 AXDND1Q5T1B0 1012 aaPredicted RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 RRAGBQ5VZM2 374 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 CRELD2Q6UXH1 353 aaPredicted RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 GRASPQ7Z6J2 395 aaPredicted RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 UBALD2Q8IYN6 164 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 KRI1Q8N9T8 703 aaKnown RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 ST13P5Q8NFI4 369 aaPredicted RBP18.58■□□□□ 0.56
BRCC3-202ENST00000340647 RASSF8Q8NHQ8 419 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 BICD1Q96G01 975 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 ZHX3Q9H4I2 956 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 HCFC1R1Q9NWW0 138 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 DPP7Q9UHL4 492 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 TCHHQ07283 1943 aa18.58■□□□□ 0.56
BRCC3-202ENST00000340647 NRG2O14511 850 aaPredicted RBP18.57■□□□□ 0.56
BRCC3-202ENST00000340647 SYN3O14994 580 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 CCL16O15467 120 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 VNN2O95498 520 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 KRT18P05783 430 aaKnown RBP18.57■□□□□ 0.56
BRCC3-202ENST00000340647 HOXA9P31269 272 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 WNT7BP56706 349 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 PDXDC1Q6P996 788 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 ANKS3Q6ZW76 656 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 SLC7A14Q8TBB6 771 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 ACSF2Q96CM8 615 aaPredicted RBP18.57■□□□□ 0.56
BRCC3-202ENST00000340647 RPP25Q9BUL9 199 aaKnown RBP18.57■□□□□ 0.56
BRCC3-202ENST00000340647 CCDC39Q9UFE4 941 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
BRCC3-202ENST00000340647 DMDP11532 3685 aa18.56■□□□□ 0.56
BRCC3-202ENST00000340647 M0QZQ0 153 aa18.56■□□□□ 0.56
BRCC3-202ENST00000340647 TRAPPC3O43617 180 aa18.56■□□□□ 0.56
BRCC3-202ENST00000340647 TBCAO75347 108 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms