RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 SIX5Q8N196 739 aa18.65■□□□□ 0.58
VSTM1-201ENST00000338372 SLC7A14Q8TBB6 771 aa18.65■□□□□ 0.58
VSTM1-201ENST00000338372 AK8Q96MA6 479 aa18.65■□□□□ 0.58
VSTM1-201ENST00000338372 SLC2A4RGQ9NR83 387 aa18.65■□□□□ 0.58
VSTM1-201ENST00000338372 SMC3Q9UQE7 1217 aa18.65■□□□□ 0.58
VSTM1-201ENST00000338372 ZFP37Q9Y6Q3 630 aaPredicted RBP18.65■□□□□ 0.58
VSTM1-201ENST00000338372 FANCMQ8IYD8 2048 aa18.64■□□□□ 0.58
VSTM1-201ENST00000338372 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 WDR27A2RRH5 827 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 H3BQV1 296 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 CFHP08603 1231 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 RPL9P32969 192 aaKnown RBP18.64■□□□□ 0.57
VSTM1-201ENST00000338372 YARSP54577 528 aaKnown RBP18.64■□□□□ 0.57
VSTM1-201ENST00000338372 ROR1Q01973 937 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 NOLC1Q14978 699 aaKnown RBP eCLIP18.64■□□□□ 0.57
VSTM1-201ENST00000338372 PPM1LQ5SGD2 360 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 VARS2Q5ST30 1063 aaKnown RBP18.64■□□□□ 0.57
VSTM1-201ENST00000338372 SLC39A4Q6P5W5 647 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 ANKS3Q6ZW76 656 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 FGF13Q92913 245 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 SUSD3Q96L08 255 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 REEP2Q9BRK0 252 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 SLC38A7Q9NVC3 462 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 DLGAP2Q9P1A6 1054 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 CDH7Q9ULB5 785 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 NUMBLQ9Y6R0 609 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
VSTM1-201ENST00000338372 SCN1AP35498 2009 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 NRG2O14511 850 aaPredicted RBP18.63■□□□□ 0.57
VSTM1-201ENST00000338372 SYN3O14994 580 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 TRAPPC3O43617 180 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 PIGRP01833 764 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 NBL1P41271 181 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 PTPAQ15257 358 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 ZBTB41Q5SVQ8 909 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 LIN9Q5TKA1 542 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 USP49Q70CQ1 688 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 HAUS6Q7Z4H7 955 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 CCDC105Q8IYK2 499 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 FLCNQ8NFG4 579 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 GPR152Q8TDT2 470 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 ATOH1Q92858 354 aaPredicted RBP18.63■□□□□ 0.57
VSTM1-201ENST00000338372 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 IRF2BPLQ9H1B7 796 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 AVENQ9NQS1 362 aaPredicted RBP18.63■□□□□ 0.57
VSTM1-201ENST00000338372 TUBGCP4Q9UGJ1 667 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 ODF2LQ9ULJ1 636 aa18.63■□□□□ 0.57
VSTM1-201ENST00000338372 RIF1Q5UIP0 2472 aaKnown RBP18.63■□□□□ 0.57
VSTM1-201ENST00000338372 SEC24AO95486 1093 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 CXCL8P10145 99 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 LRPAP1P30533 357 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 TNFSF9P41273 254 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 AARSP49588 968 aaKnown RBP eCLIP18.62■□□□□ 0.57
VSTM1-201ENST00000338372 SMTNP53814 917 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 KARSQ15046 597 aaKnown RBP18.62■□□□□ 0.57
VSTM1-201ENST00000338372 SF3A1Q15459 793 aaKnown RBP18.62■□□□□ 0.57
VSTM1-201ENST00000338372 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 BRAPQ7Z569 592 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 PLEKHA5Q9HAU0 1116 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 FBXL5Q9UKA1 691 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
VSTM1-201ENST00000338372 WDR87Q6ZQQ6 2873 aa18.62■□□□□ 0.57
VSTM1-201ENST00000338372 MIA3Q5JRA6 1907 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 TSC2P49815 1807 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 M0QZQ0 153 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 CLDN3O15551 220 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 VNN2O95498 520 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 HARSP12081 509 aaKnown RBP18.61■□□□□ 0.57
VSTM1-201ENST00000338372 ATF2P15336 505 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 PLCG1P19174 1290 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 LONP1P36776 959 aaKnown RBP18.61■□□□□ 0.57
VSTM1-201ENST00000338372 GPC5P78333 572 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 STRN3Q13033 797 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 MCM6Q14566 821 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 PHLDB3Q6NSJ2 640 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 GPBP1Q86WP2 473 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 NPAS3Q8IXF0 933 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 TCEAL8Q8IYN2 117 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 RAD54LQ92698 747 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 RTP3Q9BQQ7 232 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 MFSD1Q9H3U5 465 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 LARSQ9P2J5 1176 aaKnown RBP18.61■□□□□ 0.57
VSTM1-201ENST00000338372 ANKFY1Q9P2R3 1169 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
VSTM1-201ENST00000338372 COL4A2P08572 1712 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 FAM186AA6NE01 2351 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 XYLBO75191 536 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 CLTAP09496 248 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 GTF2BQ00403 316 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 SPAG1Q07617 926 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 ENOX2Q16206 610 aaKnown RBP18.6■□□□□ 0.57
VSTM1-201ENST00000338372 PRSS36Q5K4E3 855 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 DTWD2Q8NBA8 298 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 BEST2Q8NFU1 509 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 DDX12PQ92771 950 aa18.6■□□□□ 0.57
VSTM1-201ENST00000338372 DDX23Q9BUQ8 820 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms