RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Dennd4aE9Q8V6 1869 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tmem131O70472 1877 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ralgapa2A3KGS3 1872 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Zfp174B9EJW5 407 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 IapP03975 557 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Phka1P18826 1241 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cdca2Q14B71 982 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Hexim2Q3TVI4 313 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Nr1d1Q3UV55 615 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ugt1a9Q62452 528 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cct8l1Q80YT3 562 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pcdha9Q91Y11 979 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Atp13a1Q9EPE9 1200 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Dkc1Q9ESX5 509 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Grk1Q9WVL4 564 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ttc17E9PVB5 1198 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ifnb1P01575 182 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Epha3P29319 983 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Kcnj4P52189 445 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rad54lP70270 747 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cct5P80316 541 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pick1Q62083 416 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Igsf3Q6ZQA6 1194 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rps6ka6Q7TPS0 764 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tor4aQ8BH02 426 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pxylp1Q8BHA9 480 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Nop53Q8BK35 484 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mettl13Q91YR5 698 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Alg1Q921Q3 482 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Arhgap8Q9CXP4 425 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cnot8Q9D8X5 292 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rnaseh1O70338 285 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mex3cQ05A36 652 aaKnown RBP16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 ZbbxQ0P5X5 716 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cyfip2Q5SQX6 1253 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Sco1Q5SUC9 284 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ccdc125Q5U465 500 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cyp3a16Q64481 504 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ttyh3Q6P5F7 524 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Slc15a5Q8CBB2 566 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Smc6Q924W5 1097 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mettl7bQ9DD20 244 aa16.94■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gm17535J3KMR8 224 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Hspa9P38647 679 aaKnown RBP16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tmod1P49813 359 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ppp1r12cQ3UMT1 782 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gpr156Q6PCP7 798 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Oit3Q8R4V5 546 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tmco4Q91WU4 631 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Socs4Q91ZA6 436 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Scgb2b20Q9JI02 112 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Plagl1Q9JLQ4 704 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gm11985A0A1B0GS61 206 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Svs3aF2Z472 265 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gm6121L7MUF1 212 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rhox5P52651 210 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gngt1Q61012 74 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 EsrrbQ61539 433 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Olfr392Q7TRX6 312 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Fam228aQ8CDW1 299 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Stxbp5Q8K400 1152 aaKnown RBP16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Dr1Q91WV0 176 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 IdeQ9JHR7 1019 aa16.93■□□□□ 0.3
Trim39-203ENSMUST00000113706 Stk10O55098 966 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 UrosP51163 265 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Arf4P61750 180 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Surf6P70279 355 aaKnown RBP16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mgat3Q10470 538 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Vps72Q62481 368 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rpf1Q7TND5 349 aaKnown RBP16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Micall1Q8BGT6 870 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Il33Q8BVZ5 266 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cpa5Q8R4H4 436 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 LctF8VPT3 1931 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gm8909G3UXE9 396 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 RargP18911 458 aaKnown RBP16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Kctd19Q562E2 927 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trim37Q6PCX9 961 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cul1Q9WTX6 776 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Nfx1B1AY10 1114 aaKnown RBP16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Myo1eE9Q634 1107 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 ZfxP17012 799 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Tff2Q03404 129 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Serpinb6dQ3UWK8 375 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rhbdf2Q80WQ6 827 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Srrm3Q80WV7 648 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trim6Q8BGE7 488 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gtpbp10Q8K013 366 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 P3h4Q8K2B0 443 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trpc3Q9QZC1 836 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Slc26a3Q9WVC8 757 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Znf394Q9Z1D9 521 aa16.92■□□□□ 0.3
Trim39-203ENSMUST00000113706 Zmynd8A2A484 1235 aaKnown RBP16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ptpn3A2ALK8 913 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 E9QMW4 1145 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Gap43P06837 227 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Vav2Q60992 868 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Klhl17Q6TDP3 640 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 HomezQ80W88 542 aa16.91■□□□□ 0.3
Trim39-203ENSMUST00000113706 Q8BGD0 127 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms