Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Gm25239-201ENSMUST00000174915 86 ntBASIC41.59■■■■■ 4.25
Atp13a1Q9EPE9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
Atp13a1Q9EPE9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Atp13a1Q9EPE9 Gm15042-201ENSMUST00000120212 883 ntBASIC36.52■■■■□ 3.44
Atp13a1Q9EPE9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Atp13a1Q9EPE9 Gm24109-201ENSMUST00000175489 103 ntBASIC35.95■■■■□ 3.35
Atp13a1Q9EPE9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Atp13a1Q9EPE9 Gm15045-201ENSMUST00000117359 883 ntBASIC35.72■■■■□ 3.31
Atp13a1Q9EPE9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
Atp13a1Q9EPE9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.28■■■■□ 3.24
Atp13a1Q9EPE9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Atp13a1Q9EPE9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Atp13a1Q9EPE9 Gm23366-201ENSMUST00000175022 89 ntBASIC34.79■■■■□ 3.16
Atp13a1Q9EPE9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Atp13a1Q9EPE9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Atp13a1Q9EPE9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.08■■■■□ 3.05
Atp13a1Q9EPE9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Atp13a1Q9EPE9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Atp13a1Q9EPE9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Atp13a1Q9EPE9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.7■■■□□ 2.98
Atp13a1Q9EPE9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Atp13a1Q9EPE9 Psd-208ENSMUST00000224556 2034 ntBASIC33.58■■■□□ 2.97
Atp13a1Q9EPE9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Atp13a1Q9EPE9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Atp13a1Q9EPE9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
Atp13a1Q9EPE9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.49■■■□□ 2.95
Atp13a1Q9EPE9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Atp13a1Q9EPE9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.33■■■□□ 2.93
Atp13a1Q9EPE9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.28■■■□□ 2.92
Atp13a1Q9EPE9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Atp13a1Q9EPE9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.11■■■□□ 2.89
Atp13a1Q9EPE9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Atp13a1Q9EPE9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Atp13a1Q9EPE9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Atp13a1Q9EPE9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.79■■■□□ 2.84
Atp13a1Q9EPE9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.77■■■□□ 2.84
Atp13a1Q9EPE9 Gm25238-201ENSMUST00000174914 89 ntBASIC32.77■■■□□ 2.84
Atp13a1Q9EPE9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Atp13a1Q9EPE9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Atp13a1Q9EPE9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Atp13a1Q9EPE9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Atp13a1Q9EPE9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Atp13a1Q9EPE9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Atp13a1Q9EPE9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.21■■■□□ 2.75
Atp13a1Q9EPE9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
Atp13a1Q9EPE9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.11■■■□□ 2.73
Atp13a1Q9EPE9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Atp13a1Q9EPE9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Atp13a1Q9EPE9 Gm27325-201ENSMUST00000175467 74 ntBASIC32.03■■■□□ 2.72
Atp13a1Q9EPE9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Atp13a1Q9EPE9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Atp13a1Q9EPE9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.89■■■□□ 2.69
Atp13a1Q9EPE9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.82■■■□□ 2.68
Atp13a1Q9EPE9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Atp13a1Q9EPE9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.71■■■□□ 2.67
Atp13a1Q9EPE9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
Atp13a1Q9EPE9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.68■■■□□ 2.66
Atp13a1Q9EPE9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Atp13a1Q9EPE9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Atp13a1Q9EPE9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Atp13a1Q9EPE9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.46■■■□□ 2.63
Atp13a1Q9EPE9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Atp13a1Q9EPE9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Atp13a1Q9EPE9 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.41■■■□□ 2.62
Atp13a1Q9EPE9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Atp13a1Q9EPE9 Rab21-202ENSMUST00000218831 843 ntBASIC31.36■■■□□ 2.61
Atp13a1Q9EPE9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Atp13a1Q9EPE9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Atp13a1Q9EPE9 Gm25262-201ENSMUST00000174934 133 ntBASIC31.34■■■□□ 2.61
Atp13a1Q9EPE9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Atp13a1Q9EPE9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Atp13a1Q9EPE9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Atp13a1Q9EPE9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Atp13a1Q9EPE9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Atp13a1Q9EPE9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.23■■■□□ 2.59
Atp13a1Q9EPE9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Atp13a1Q9EPE9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.16■■■□□ 2.58
Atp13a1Q9EPE9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atp13a1Q9EPE9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Atp13a1Q9EPE9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Atp13a1Q9EPE9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.04■■■□□ 2.56
Atp13a1Q9EPE9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Atp13a1Q9EPE9 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.95■■■□□ 2.54
Atp13a1Q9EPE9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Atp13a1Q9EPE9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Atp13a1Q9EPE9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.88■■■□□ 2.53
Atp13a1Q9EPE9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Atp13a1Q9EPE9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.82■■■□□ 2.52
Atp13a1Q9EPE9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.78■■■□□ 2.52
Atp13a1Q9EPE9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Atp13a1Q9EPE9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Atp13a1Q9EPE9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Atp13a1Q9EPE9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.69■■■□□ 2.5
Atp13a1Q9EPE9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Atp13a1Q9EPE9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atp13a1Q9EPE9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Atp13a1Q9EPE9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.57■■■□□ 2.48
Atp13a1Q9EPE9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Atp13a1Q9EPE9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.51■■■□□ 2.47
Atp13a1Q9EPE9 Gm26115-201ENSMUST00000175605 87 ntBASIC30.49■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms