RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	PEX27	Q08580	376 aa		4.26	□□□□□ -1.73
snR19	snR19	YPL257W	Q08974	193 aa		4.26	□□□□□ -1.73
snR19	snR19	YPL245W	Q12179	454 aa	Known RBP	4.26	□□□□□ -1.73
snR19	snR19	YGK3	Q12222	375 aa	Predicted RBP	4.26	□□□□□ -1.73
snR19	snR19	WIP1	Q2V2P8	89 aa		4.26	□□□□□ -1.73
snR19	snR19	RAD52	P06778	471 aa	Known RBP	4.25	□□□□□ -1.73
snR19	snR19	UNG1	P12887	359 aa		4.25	□□□□□ -1.73
snR19	snR19	PDX1	P16451	410 aa		4.25	□□□□□ -1.73
snR19	snR19	EXG1	P23776	448 aa	Known RBP	4.25	□□□□□ -1.73
snR19	snR19	UBC8	P28263	218 aa		4.25	□□□□□ -1.73
snR19	snR19	EHD3	P28817	500 aa		4.25	□□□□□ -1.73
snR19	snR19	ACB1	P31787	87 aa		4.25	□□□□□ -1.73
snR19	snR19	ERG1	P32476	496 aa	Known RBP	4.25	□□□□□ -1.73
snR19	snR19	AEP1	P32493	518 aa		4.25	□□□□□ -1.73
snR19	snR19	MRPL6	P32904	214 aa		4.25	□□□□□ -1.73
snR19	snR19	DOA1	P36037	715 aa		4.25	□□□□□ -1.73
snR19	snR19	ATG8	P38182	117 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
snR19	snR19	YBR220C	P38318	560 aa		4.25	□□□□□ -1.73
snR19	snR19	PRM10	P42946	383 aa		4.25	□□□□□ -1.73
snR19	snR19	YJR011C	P47086	261 aa	Predicted RBP	4.25	□□□□□ -1.73
snR19	snR19	ASN2	P49090	572 aa	Known RBP	4.25	□□□□□ -1.73
snR19	snR19	YGL185C	P53100	379 aa		4.25	□□□□□ -1.73
snR19	snR19	YGR066C	P53242	292 aa		4.25	□□□□□ -1.73
snR19	snR19	MKC7	P53379	596 aa		4.25	□□□□□ -1.73
snR19	snR19	DUG3	P53871	357 aa		4.25	□□□□□ -1.73
snR19	snR19	EOS1	P53938	366 aa		4.25	□□□□□ -1.73
snR19	snR19	RNH202	Q05635	350 aa		4.25	□□□□□ -1.73
snR19	snR19	YET3	Q07451	203 aa		4.25	□□□□□ -1.73
snR19	snR19	PST2	Q12335	198 aa	Known RBP	4.25	□□□□□ -1.73
snR19	snR19	PFK27	Q12471	397 aa	Predicted RBP	4.25	□□□□□ -1.73
snR19	snR19	YPR145C-A	Q2V2P0	78 aa		4.25	□□□□□ -1.73
snR19	snR19	MHF1	Q3E835	90 aa		4.25	□□□□□ -1.73
snR19	snR19	SUC2	P00724	532 aa		4.24	□□□□□ -1.73
snR19	snR19	GAL7	P08431	366 aa		4.24	□□□□□ -1.73
snR19	snR19	ERD2	P18414	219 aa		4.24	□□□□□ -1.73
snR19	snR19	PET18	P25362	215 aa		4.24	□□□□□ -1.73
snR19	snR19	RPS2	P25443	254 aa	Known RBP	4.24	□□□□□ -1.73
snR19	snR19	TAH1	P25638	111 aa	Predicted RBP	4.24	□□□□□ -1.73
snR19	snR19	YEF1	P32622	495 aa		4.24	□□□□□ -1.73
snR19	snR19	MNS1	P32906	549 aa		4.24	□□□□□ -1.73
snR19	snR19	YHR035W	P38769	630 aa		4.24	□□□□□ -1.73
snR19	snR19	SEC72	P39742	193 aa	Known RBP	4.24	□□□□□ -1.73
snR19	snR19	COG3	P40094	801 aa		4.24	□□□□□ -1.73
snR19	snR19	GAT2	P40209	560 aa		4.24	□□□□□ -1.73
snR19	snR19	PEP8	P40335	379 aa		4.24	□□□□□ -1.73
snR19	snR19	PAN6	P40459	309 aa		4.24	□□□□□ -1.73
snR19	snR19	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
snR19	snR19	AZF1	P41696	914 aa		4.24	□□□□□ -1.73
snR19	snR19	YAR1	P46683	200 aa		4.24	□□□□□ -1.73
snR19	snR19	DAN1	P47178	298 aa		4.24	□□□□□ -1.73
snR19	snR19	AVT4	P50944	713 aa		4.24	□□□□□ -1.73
snR19	snR19	YGR126W	P53274	230 aa		4.24	□□□□□ -1.73
snR19	snR19	ERV29	P53337	310 aa		4.24	□□□□□ -1.73
snR19	snR19	RPA49	Q01080	415 aa	Predicted RBP	4.24	□□□□□ -1.73
snR19	snR19	NUP49	Q02199	472 aa		4.24	□□□□□ -1.73
snR19	snR19	CTF19	Q02732	369 aa		4.24	□□□□□ -1.73
snR19	snR19	MSS11	Q03825	758 aa		4.24	□□□□□ -1.73
snR19	snR19	AIM32	Q04689	311 aa		4.24	□□□□□ -1.73
snR19	snR19	NAT4	Q04751	285 aa		4.24	□□□□□ -1.73
snR19	snR19	DIC1	Q06143	298 aa		4.24	□□□□□ -1.73
snR19	snR19	RIF2	Q06208	395 aa		4.24	□□□□□ -1.73
snR19	snR19	SRO7	Q12038	1033 aa		4.24	□□□□□ -1.73
snR19	snR19	POM33	Q12164	279 aa		4.24	□□□□□ -1.73
snR19	snR19	NCE102	Q12207	173 aa	RIP-Chip data	4.24	□□□□□ -1.73	not detected
snR19	snR19	TPO4	Q12256	659 aa		4.24	□□□□□ -1.73
snR19	snR19	SKS1	Q12505	502 aa		4.24	□□□□□ -1.73
snR19	snR19	YOR304C-A	O14468	76 aa		4.23	□□□□□ -1.73
snR19	snR19	QCR2	P07257	368 aa		4.23	□□□□□ -1.73
snR19	snR19	SGA1	P08019	549 aa		4.23	□□□□□ -1.73
snR19	snR19	NHP6B	P11633	99 aa	Known RBP	4.23	□□□□□ -1.73
snR19	snR19	ZRC1	P20107	442 aa		4.23	□□□□□ -1.73
snR19	snR19	MGT1	P26188	188 aa		4.23	□□□□□ -1.73
snR19	snR19	ERG9	P29704	444 aa		4.23	□□□□□ -1.73
snR19	snR19	AFG1	P32317	509 aa		4.23	□□□□□ -1.73
snR19	snR19	CLB6	P32943	380 aa		4.23	□□□□□ -1.73
snR19	snR19	SRY1	P36007	326 aa		4.23	□□□□□ -1.73
snR19	snR19	TUL1	P36096	758 aa		4.23	□□□□□ -1.73
snR19	snR19	SDH4	P37298	181 aa		4.23	□□□□□ -1.73
snR19	snR19	YPC1	P38298	316 aa		4.23	□□□□□ -1.73
snR19	snR19	FAD1	P38913	306 aa		4.23	□□□□□ -1.73
snR19	snR19	YJL218W	P40892	196 aa	Known RBP	4.23	□□□□□ -1.73
snR19	snR19	GDS1	P41913	522 aa		4.23	□□□□□ -1.73
snR19	snR19	MCM22	P47167	239 aa		4.23	□□□□□ -1.73
snR19	snR19	COS10	P52924	374 aa		4.23	□□□□□ -1.73
snR19	snR19	YNR066C	P53752	436 aa		4.23	□□□□□ -1.73
snR19	snR19	CUS2	P53830	285 aa	Predicted RBP	4.23	□□□□□ -1.73
snR19	snR19	TIM10	P87108	93 aa		4.23	□□□□□ -1.73
snR19	snR19	RHO4	Q00246	291 aa		4.23	□□□□□ -1.73
snR19	snR19	SPR6	Q01684	191 aa		4.23	□□□□□ -1.73
snR19	snR19	MAK3	Q03503	176 aa		4.23	□□□□□ -1.73
snR19	snR19	SEN15	Q04675	128 aa		4.23	□□□□□ -1.73
snR19	snR19	PEX30	Q06169	523 aa		4.23	□□□□□ -1.73
snR19	snR19	RLM1	Q12224	676 aa		4.23	□□□□□ -1.73
snR19	snR19	YDL199C	Q12407	687 aa		4.23	□□□□□ -1.73
snR19	snR19	TFC7	Q12415	435 aa		4.23	□□□□□ -1.73
snR19	snR19	MHT1	Q12525	324 aa		4.23	□□□□□ -1.73
snR19	snR19	YIR021W-A	Q3E739	70 aa		4.23	□□□□□ -1.73
snR19	snR19	COX5B	P00425	151 aa		4.22	□□□□□ -1.73
snR19	snR19	HAP3	P13434	144 aa		4.22	□□□□□ -1.73
snR19	snR19	PDA1	P16387	420 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms