RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ATG39Q06159 398 aa2.79□□□□□ -1.96
LCB4YOR171C FSF1Q12029 327 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C ATP14Q12349 124 aa2.79□□□□□ -1.96
LCB4YOR171C GEP5Q12393 293 aa2.79□□□□□ -1.96
LCB4YOR171C DET1Q99288 334 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C HAP2P06774 265 aa2.78□□□□□ -1.96
LCB4YOR171C PHO2P07269 559 aa2.78□□□□□ -1.96
LCB4YOR171C GCN3P14741 305 aa2.78□□□□□ -1.96
LCB4YOR171C CDC50P25656 391 aa2.78□□□□□ -1.96
LCB4YOR171C RPL16BP26785 198 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C APE2P32454 952 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C COX13P32799 129 aa2.78□□□□□ -1.96
LCB4YOR171C SRY1P36007 326 aa2.78□□□□□ -1.96
LCB4YOR171C MRPL15P36523 253 aa2.78□□□□□ -1.96
LCB4YOR171C SDS24P38314 527 aa2.78□□□□□ -1.96
LCB4YOR171C YGP1P38616 354 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C MDM31P38880 579 aa2.78□□□□□ -1.96
LCB4YOR171C GVP36P40531 326 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C HAC1P41546 238 aa2.78□□□□□ -1.96
LCB4YOR171C MEP2P41948 499 aa2.78□□□□□ -1.96
LCB4YOR171C IKS1P47042 667 aa2.78□□□□□ -1.96
LCB4YOR171C MCM22P47167 239 aa2.78□□□□□ -1.96
LCB4YOR171C RPS12P48589 143 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C COQ5P49017 307 aa2.78□□□□□ -1.96
LCB4YOR171C ARO8P53090 500 aaKnown RBP2.78□□□□□ -1.96
LCB4YOR171C FRE4P53746 719 aa2.78□□□□□ -1.96
LCB4YOR171C YNL234WP53857 426 aa2.78□□□□□ -1.96
LCB4YOR171C DUG3P53871 357 aa2.78□□□□□ -1.96
LCB4YOR171C SUR7P54003 302 aa2.78□□□□□ -1.96
LCB4YOR171C MRX11Q03079 207 aa2.78□□□□□ -1.96
LCB4YOR171C SEI1Q06058 285 aa2.78□□□□□ -1.96
LCB4YOR171C YPL257WQ08974 193 aa2.78□□□□□ -1.96
LCB4YOR171C MHT1Q12525 324 aa2.78□□□□□ -1.96
LCB4YOR171C BUD4P47136 1447 aa2.78□□□□□ -1.96
LCB4YOR171C PBI2P0CT04 75 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C BUB3P26449 341 aa2.77□□□□□ -1.97
LCB4YOR171C MRP49P32388 137 aa2.77□□□□□ -1.97
LCB4YOR171C UTR4P32626 227 aa2.77□□□□□ -1.97
LCB4YOR171C MCR1P36060 302 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C PAN3P36102 679 aaPredicted RBP2.77□□□□□ -1.97
LCB4YOR171C ATG12P38316 186 aa2.77□□□□□ -1.97
LCB4YOR171C ARC40P38328 384 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C TRR2P38816 342 aa2.77□□□□□ -1.97
LCB4YOR171C KEG1P43614 200 aa2.77□□□□□ -1.97
LCB4YOR171C PRM8P53174 237 aa2.77□□□□□ -1.97
LCB4YOR171C BUD32P53323 261 aa2.77□□□□□ -1.97
LCB4YOR171C TMA23Q03525 211 aa2.77□□□□□ -1.97
LCB4YOR171C YMR317WQ04893 1140 aa2.77□□□□□ -1.97
LCB4YOR171C PAL1Q05518 499 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C BSC1Q12140 328 aa2.77□□□□□ -1.97
LCB4YOR171C ERV2Q12284 196 aa2.77□□□□□ -1.97
LCB4YOR171C YPL119C-AQ3E751 87 aa2.77□□□□□ -1.97
LCB4YOR171C YDL085C-AQ3E7B7 68 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C COX5AP00424 153 aa2.77□□□□□ -1.97
LCB4YOR171C CAP2P13517 287 aa2.77□□□□□ -1.97
LCB4YOR171C SEC59P20048 519 aa2.77□□□□□ -1.97
LCB4YOR171C PEX34P25584 144 aa2.77□□□□□ -1.97
LCB4YOR171C SPT4P32914 102 aaPredicted RBP2.77□□□□□ -1.97
LCB4YOR171C TIR2P33890 251 aa2.77□□□□□ -1.97
LCB4YOR171C PTC1P35182 281 aa2.77□□□□□ -1.97
LCB4YOR171C YPC1P38298 316 aa2.77□□□□□ -1.97
LCB4YOR171C YPT31P38555 223 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C RPS20P38701 121 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C YPT35P38815 214 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C BAT1P38891 393 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C CHL4P38907 458 aa2.77□□□□□ -1.97
LCB4YOR171C YIL029CP40538 142 aa2.77□□□□□ -1.97
LCB4YOR171C HMS2P47175 358 aa2.77□□□□□ -1.97
LCB4YOR171C TOS8P53147 276 aa2.77□□□□□ -1.97
LCB4YOR171C YNL184CP53876 108 aa2.77□□□□□ -1.97
LCB4YOR171C UTP15Q04305 513 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C YTH1Q06102 208 aaPredicted RBP2.77□□□□□ -1.97
LCB4YOR171C TAZ1Q06510 381 aa2.77□□□□□ -1.97
LCB4YOR171C GAT3Q07928 141 aa2.77□□□□□ -1.97
LCB4YOR171C COQ10Q08058 207 aa2.77□□□□□ -1.97
LCB4YOR171C UTP23Q12339 254 aaKnown RBP2.77□□□□□ -1.97
LCB4YOR171C YKR104WP0CE69 306 aa2.76□□□□□ -1.97
LCB4YOR171C YCR090CP25654 182 aaKnown RBP2.76□□□□□ -1.97
LCB4YOR171C SFC1P33303 322 aa2.76□□□□□ -1.97
LCB4YOR171C YBR056WP38081 501 aa2.76□□□□□ -1.97
LCB4YOR171C LAG1P38703 411 aa2.76□□□□□ -1.97
LCB4YOR171C DOG2P38773 246 aa2.76□□□□□ -1.97
LCB4YOR171C DOG1P38774 246 aa2.76□□□□□ -1.97
LCB4YOR171C MST28P39552 234 aa2.76□□□□□ -1.97
LCB4YOR171C PEX22P39718 180 aa2.76□□□□□ -1.97
LCB4YOR171C AYR1P40471 297 aa2.76□□□□□ -1.97
LCB4YOR171C MIC19P43594 170 aa2.76□□□□□ -1.97
LCB4YOR171C BXI1P48558 297 aa2.76□□□□□ -1.97
LCB4YOR171C UBC12P52491 188 aa2.76□□□□□ -1.97
LCB4YOR171C YPS5P53057 165 aa2.76□□□□□ -1.97
LCB4YOR171C PCP1P53259 346 aa2.76□□□□□ -1.97
LCB4YOR171C SMM1P53720 384 aaKnown RBP2.76□□□□□ -1.97
LCB4YOR171C TRM44Q02648 567 aaKnown RBP2.76□□□□□ -1.97
LCB4YOR171C CNL1Q06333 122 aa2.76□□□□□ -1.97
LCB4YOR171C YAP7Q08182 245 aa2.76□□□□□ -1.97
LCB4YOR171C YPR064WQ12492 139 aa2.76□□□□□ -1.97
LCB4YOR171C YLR099W-AQ3E798 87 aa2.76□□□□□ -1.97
LCB4YOR171C SUC2P00724 532 aa2.75□□□□□ -1.97
LCB4YOR171C UBI4P0CG63 381 aaKnown RBP2.75□□□□□ -1.97
LCB4YOR171C PCL1P24867 279 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms