RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	SPS18	P32572	300 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	PDC2	P32896	925 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	ECM31	P38122	312 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	MTC4	P38335	694 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	SHO1	P40073	367 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	AYR1	P40471	297 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YIA6	P40556	373 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	MRPL49	P40858	161 aa	Predicted RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	GLC8	P41818	229 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YCH1	P42937	148 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	ARO8	P53090	500 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	MAL13	P53338	473 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	MSO1	P53604	210 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	CAF40	P53829	373 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YLR152C	P54072	576 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	MRX11	Q03079	207 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	CCE1	Q03702	353 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	GPI17	Q04080	534 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YDR391C	Q04170	232 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	GMC1	Q04399	608 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	CNL1	Q06333	122 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	NDD1	Q08887	554 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YPL257W	Q08974	193 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	ERV2	Q12284	196 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	ORT1	Q12375	292 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	OPI3	P05375	206 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	SPS2	P08459	502 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	RPL12A	P0CX53	165 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	RPL12B	P0CX54	165 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	GCN3	P14741	305 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	ERD2	P18414	219 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	PHO80	P20052	293 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	CCA1	P21269	546 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	PRE1	P22141	198 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	PPH21	P23594	369 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	PCL1	P24867	279 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	PEX34	P25584	144 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	TIP1	P27654	210 aa	Predicted RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	MRP49	P32388	137 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	MRPS5	P33759	307 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	MRPL28	P36527	147 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	YBR137W	P38276	179 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	RPS20	P38701	121 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	LSM4	P40070	187 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	TIF34	P40217	347 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	MOB1	P40484	314 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	GTT1	P40582	234 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	YJR015W	P47090	510 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	TPN1	P53099	579 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	YNR048W	P53740	393 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	PDR17	P53844	350 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	VHS1	Q03785	461 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	AIM36	Q03798	255 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	VBA1	Q04301	562 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	UTP15	Q04305	513 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	PAL1	Q05518	499 aa	Known RBP	2.95	□□□□□ -1.94
VAM10	YOR068C	YOL024W	Q08172	172 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	RNH203	Q12338	110 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	MHT1	Q12525	324 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	YOR338W	Q99326	363 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	BI3	Q9ZZW7	517 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	SIR4	P11978	1358 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	TY1B-H	O13535	1793 aa		2.95	□□□□□ -1.94
VAM10	YOR068C	MMS1	Q06211	1407 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	BCY1	P07278	416 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	OAC1	P32332	324 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	QRI5	P32344	111 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	GLC7	P32598	312 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	NTF2	P33331	125 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	LHP1	P33399	275 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
VAM10	YOR068C	YKR041W	P36134	250 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	ECM33	P38248	429 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	YHR035W	P38769	630 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	RPF1	P38805	295 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	SMB1	P40018	196 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	HAC1	P41546	238 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	PMT4	P46971	762 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	AIM23	P47015	356 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	OST3	P48439	350 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	MRM2	P53123	320 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	LST7	P53237	242 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	RSM27	P53305	110 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	YNR062C	P53748	327 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	HCH1	P53834	153 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	PIR3	Q03180	325 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	FMN1	Q03778	218 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	IGO2	Q9P305	131 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	ADE6	P38972	1358 aa	Known RBP	2.94	□□□□□ -1.94
VAM10	YOR068C	MHP1	P43638	1398 aa		2.94	□□□□□ -1.94
VAM10	YOR068C	KRE5	P22023	1365 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	GRX2	P17695	143 aa	Known RBP	2.93	□□□□□ -1.94
VAM10	YOR068C	MIR1	P23641	311 aa	Known RBP	2.93	□□□□□ -1.94
VAM10	YOR068C	POF1	P25576	258 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	YCR022C	P25620	114 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	ATS1	P31386	333 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	SEC17	P32602	292 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	SNC2	P33328	115 aa		2.93	□□□□□ -1.94
VAM10	YOR068C	YKL187C	P34231	750 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 90 ms