RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C SCW4P53334 386 aaKnown RBP8.52□□□□□ -1.05
SPT20YOL148C YNR066CP53752 436 aa8.52□□□□□ -1.05
SPT20YOL148C SRL2Q12020 392 aa8.52□□□□□ -1.05
SPT20YOL148C MSB2P32334 1306 aa8.51□□□□□ -1.05
SPT20YOL148C MET3P08536 511 aa8.51□□□□□ -1.05
SPT20YOL148C RPS25BP0C0T4 108 aaKnown RBP8.51□□□□□ -1.05
SPT20YOL148C HAP3P13434 144 aa8.51□□□□□ -1.05
SPT20YOL148C PRE2P30656 287 aaKnown RBP8.51□□□□□ -1.05
SPT20YOL148C MDL1P33310 695 aa8.51□□□□□ -1.05
SPT20YOL148C YIL161WP40449 235 aaKnown RBP8.51□□□□□ -1.05
SPT20YOL148C YGR149WP48236 432 aa8.51□□□□□ -1.05
SPT20YOL148C EKI1Q03764 534 aa8.51□□□□□ -1.05
SPT20YOL148C RPS25AQ3E792 108 aaPredicted RBP8.51□□□□□ -1.05
SPT20YOL148C HTB1P02293 131 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C HTB2P02294 131 aa8.5□□□□□ -1.05
SPT20YOL148C PDX1P16451 410 aa8.5□□□□□ -1.05
SPT20YOL148C YSR3P23501 404 aa8.5□□□□□ -1.05
SPT20YOL148C MIR1P23641 311 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C SLC1P33333 303 aa8.5□□□□□ -1.05
SPT20YOL148C MOT2P34909 587 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C NSA2P40078 261 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C CFD1P40558 293 aa8.5□□□□□ -1.05
SPT20YOL148C CIN5P40917 295 aa8.5□□□□□ -1.05
SPT20YOL148C OGG1P53397 376 aaPredicted RBP8.5□□□□□ -1.05
SPT20YOL148C SMM1P53720 384 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C ALG12P53730 551 aa8.5□□□□□ -1.05
SPT20YOL148C YCT1Q12235 531 aa8.5□□□□□ -1.05
SPT20YOL148C LSB5P25369 354 aa8.5□□□□□ -1.05
SPT20YOL148C AIM29P36154 155 aa8.5□□□□□ -1.05
SPT20YOL148C AIR1P40507 360 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C VNX1P42839 908 aa8.5□□□□□ -1.05
SPT20YOL148C RMD9P53140 646 aaKnown RBP8.5□□□□□ -1.05
SPT20YOL148C SGF73P53165 657 aa8.5□□□□□ -1.05
SPT20YOL148C BDS1Q08347 646 aa8.5□□□□□ -1.05
SPT20YOL148C QCR2P07257 368 aa8.49□□□□□ -1.05
SPT20YOL148C GDH1P07262 454 aaKnown RBP8.49□□□□□ -1.05
SPT20YOL148C OLE1P21147 510 aaKnown RBP8.49□□□□□ -1.05
SPT20YOL148C ERG3P32353 365 aa8.49□□□□□ -1.05
SPT20YOL148C CUE1P38428 203 aa8.49□□□□□ -1.05
SPT20YOL148C PEX28P38848 579 aa8.49□□□□□ -1.05
SPT20YOL148C HEM14P40012 539 aa8.49□□□□□ -1.05
SPT20YOL148C YIP4P53093 235 aa8.49□□□□□ -1.05
SPT20YOL148C FLC3P53121 802 aa8.49□□□□□ -1.05
SPT20YOL148C YPL014WQ02606 381 aa8.49□□□□□ -1.05
SPT20YOL148C TVP18Q04767 167 aa8.49□□□□□ -1.05
SPT20YOL148C YPQ1Q12010 308 aa8.49□□□□□ -1.05
SPT20YOL148C SUL2Q12325 893 aa8.49□□□□□ -1.05
SPT20YOL148C ILV5P06168 395 aaKnown RBP8.48□□□□□ -1.05
SPT20YOL148C NHP6AP11632 93 aaKnown RBP8.48□□□□□ -1.05
SPT20YOL148C ADK2P26364 225 aa8.48□□□□□ -1.05
SPT20YOL148C MDH3P32419 343 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
SPT20YOL148C TIM12P32830 109 aa8.48□□□□□ -1.05
SPT20YOL148C SLM6P38343 150 aa8.48□□□□□ -1.05
SPT20YOL148C HSP10P38910 106 aa8.48□□□□□ -1.05
SPT20YOL148C PDR16P53860 351 aaKnown RBP8.48□□□□□ -1.05
SPT20YOL148C NRG1Q03125 231 aa8.48□□□□□ -1.05
SPT20YOL148C TMN2Q04562 672 aa8.48□□□□□ -1.05
SPT20YOL148C ROY1Q04847 553 aa8.48□□□□□ -1.05
SPT20YOL148C ATG5Q12380 294 aa8.48□□□□□ -1.05
SPT20YOL148C SRF1Q12516 437 aa8.48□□□□□ -1.05
SPT20YOL148C RNA15P25299 296 aaPredicted RBP8.47□□□□□ -1.05
SPT20YOL148C MTC7P32633 139 aa8.47□□□□□ -1.05
SPT20YOL148C UPS2P35200 230 aa8.47□□□□□ -1.05
SPT20YOL148C ARC40P38328 384 aaKnown RBP8.47□□□□□ -1.05
SPT20YOL148C PEX21P50091 288 aa8.47□□□□□ -1.05
SPT20YOL148C YLR152CP54072 576 aa8.47□□□□□ -1.05
SPT20YOL148C RAX2Q12465 1220 aa8.47□□□□□ -1.05
SPT20YOL148C GCS1P35197 352 aa8.47□□□□□ -1.05
SPT20YOL148C GPP1P41277 250 aaKnown RBP8.47□□□□□ -1.05
SPT20YOL148C YPL067CQ02754 198 aa8.47□□□□□ -1.05
SPT20YOL148C VPS28Q02767 242 aa8.47□□□□□ -1.05
SPT20YOL148C MRX8Q05473 314 aa8.47□□□□□ -1.05
SPT20YOL148C ISR1Q06098 443 aaKnown RBP8.47□□□□□ -1.05
SPT20YOL148C YDR262WQ12331 272 aa8.47□□□□□ -1.05
SPT20YOL148C YOP1Q12402 180 aa8.47□□□□□ -1.05
SPT20YOL148C YBL029C-AQ3E756 94 aa8.47□□□□□ -1.05
SPT20YOL148C BGL2P15703 313 aaKnown RBP8.46□□□□□ -1.06
SPT20YOL148C SSH4P32343 579 aa8.46□□□□□ -1.06
SPT20YOL148C ERG1P32476 496 aaKnown RBP8.46□□□□□ -1.06
SPT20YOL148C YOR062CP36025 268 aa8.46□□□□□ -1.06
SPT20YOL148C RPL14AP36105 138 aaKnown RBP8.46□□□□□ -1.06
SPT20YOL148C RPL14BP38754 138 aaKnown RBP8.46□□□□□ -1.06
SPT20YOL148C FLO5P38894 1075 aa8.46□□□□□ -1.06
SPT20YOL148C PEX7P39108 375 aa8.46□□□□□ -1.06
SPT20YOL148C ATG27P46989 271 aa8.46□□□□□ -1.06
SPT20YOL148C TGL2P54857 326 aa8.46□□□□□ -1.06
SPT20YOL148C YOL073CQ08232 322 aa8.46□□□□□ -1.06
SPT20YOL148C MCT1Q12283 360 aa8.46□□□□□ -1.06
SPT20YOL148C LAS17Q12446 633 aa8.46□□□□□ -1.06
SPT20YOL148C PRE1P22141 198 aaKnown RBP8.45□□□□□ -1.06
SPT20YOL148C SLY41P22215 453 aa8.45□□□□□ -1.06
SPT20YOL148C YKL075CP36083 450 aa8.45□□□□□ -1.06
SPT20YOL148C YKL071WP36086 256 aa8.45□□□□□ -1.06
SPT20YOL148C SKN7P38889 622 aa8.45□□□□□ -1.06
SPT20YOL148C ALG9P53868 555 aaKnown RBP8.45□□□□□ -1.06
SPT20YOL148C YDR366CP87287 132 aa8.45□□□□□ -1.06
SPT20YOL148C FSH2Q05015 223 aa8.45□□□□□ -1.06
SPT20YOL148C MRPL51Q06090 140 aaPredicted RBP8.45□□□□□ -1.06
SPT20YOL148C YPL272CQ08984 517 aa8.45□□□□□ -1.06
SPT20YOL148C SAC7P17121 654 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms