RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SWM2YNR004W DOG1P38774 246 aa1.68□□□□□ -2.14
SWM2YNR004W YER085CP40058 173 aa1.68□□□□□ -2.14
SWM2YNR004W RPC17P47076 161 aa1.68□□□□□ -2.14
SWM2YNR004W YJR079WP47126 109 aa1.68□□□□□ -2.14
SWM2YNR004W RPL9BP51401 191 aaKnown RBP1.68□□□□□ -2.14
SWM2YNR004W NSA1P53136 463 aaPredicted RBP1.68□□□□□ -2.14
SWM2YNR004W YNL134CP53912 376 aaKnown RBP1.68□□□□□ -2.14
SWM2YNR004W YMD8Q03697 442 aa1.68□□□□□ -2.14
SWM2YNR004W YMR166CQ03829 368 aa1.68□□□□□ -2.14
SWM2YNR004W EMI1Q04406 187 aa1.68□□□□□ -2.14
SWM2YNR004W YPR172WQ06608 200 aa1.68□□□□□ -2.14
SWM2YNR004W BOL1Q3E793 110 aa1.68□□□□□ -2.14
SWM2YNR004W BCY1P07278 416 aaKnown RBP1.67□□□□□ -2.14
SWM2YNR004W RPO26P20435 155 aa1.67□□□□□ -2.14
SWM2YNR004W RPT5P33297 434 aaKnown RBP1.67□□□□□ -2.14
SWM2YNR004W PIR5P46999 287 aa1.67□□□□□ -2.14
SWM2YNR004W FYV6P53913 173 aa1.67□□□□□ -2.14
SWM2YNR004W RGM1Q00453 211 aa1.67□□□□□ -2.14
SWM2YNR004W MIX17Q03667 156 aa1.67□□□□□ -2.14
SWM2YNR004W YML096WQ04489 525 aa1.67□□□□□ -2.14
SWM2YNR004W YOR029WQ12243 111 aa1.67□□□□□ -2.14
SWM2YNR004W TPO4Q12256 659 aa1.67□□□□□ -2.14
SWM2YNR004W SEC22P22214 214 aa1.66□□□□□ -2.14
SWM2YNR004W VMA6P32366 345 aaKnown RBP1.66□□□□□ -2.14
SWM2YNR004W ERG24P32462 438 aaKnown RBP1.66□□□□□ -2.14
SWM2YNR004W VMA11P32842 164 aa1.66□□□□□ -2.14
SWM2YNR004W RPF1P38805 295 aaKnown RBP1.66□□□□□ -2.14
SWM2YNR004W SNX4P47057 423 aa1.66□□□□□ -2.14
SWM2YNR004W JHD2P47156 728 aaPredicted RBP1.66□□□□□ -2.14
SWM2YNR004W MIC26P50087 233 aa1.66□□□□□ -2.14
SWM2YNR004W SSU72P53538 206 aaPredicted RBP1.66□□□□□ -2.14
SWM2YNR004W SLM2P53955 656 aa1.66□□□□□ -2.14
SWM2YNR004W YNL046WP53956 172 aa1.66□□□□□ -2.14
SWM2YNR004W AKR2Q12013 749 aa1.66□□□□□ -2.14
SWM2YNR004W YPR011CQ12251 326 aa1.66□□□□□ -2.14
SWM2YNR004W INO80P53115 1489 aa1.66□□□□□ -2.14
SWM2YNR004W SNA3P14359 133 aa1.65□□□□□ -2.15
SWM2YNR004W PPA2P28239 310 aa1.65□□□□□ -2.15
SWM2YNR004W GRE3P38715 327 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SWM2YNR004W YHR125WP38831 101 aa1.65□□□□□ -2.15
SWM2YNR004W NBP1P52919 319 aaPredicted RBP1.65□□□□□ -2.15
SWM2YNR004W ERG25P53045 309 aa1.65□□□□□ -2.15
SWM2YNR004W YGR219WP53307 113 aa1.65□□□□□ -2.15
SWM2YNR004W FBA1P14540 359 aaKnown RBP1.64□□□□□ -2.15
SWM2YNR004W EHD3P28817 500 aa1.64□□□□□ -2.15
SWM2YNR004W NTG1P31378 399 aa1.64□□□□□ -2.15
SWM2YNR004W MDH3P32419 343 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SWM2YNR004W MSN4P33749 630 aa1.64□□□□□ -2.15
SWM2YNR004W BMH2P34730 273 aaKnown RBP1.64□□□□□ -2.15
SWM2YNR004W YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
SWM2YNR004W YBR063CP38083 404 aa1.64□□□□□ -2.15
SWM2YNR004W LDB7P38210 180 aa1.64□□□□□ -2.15
SWM2YNR004W YAR068WP39564 161 aa1.64□□□□□ -2.15
SWM2YNR004W OTU1P43558 301 aa1.64□□□□□ -2.15
SWM2YNR004W YGL159WP53110 370 aa1.64□□□□□ -2.15
SWM2YNR004W RSM10Q03201 203 aa1.64□□□□□ -2.15
SWM2YNR004W CWC21Q03375 135 aaKnown RBP1.64□□□□□ -2.15
SWM2YNR004W RDS3Q06835 107 aaPredicted RBP1.64□□□□□ -2.15
SWM2YNR004W USB1Q12208 290 aaKnown RBP1.64□□□□□ -2.15
SWM2YNR004W BBP1Q12365 385 aa1.64□□□□□ -2.15
SWM2YNR004W YBR121C-AP0C5L4 52 aa1.63□□□□□ -2.15
SWM2YNR004W NHP6BP11633 99 aaKnown RBP1.63□□□□□ -2.15
SWM2YNR004W RPS5P26783 225 aaKnown RBP1.63□□□□□ -2.15
SWM2YNR004W YOR062CP36025 268 aa1.63□□□□□ -2.15
SWM2YNR004W RIB1P38066 345 aa1.63□□□□□ -2.15
SWM2YNR004W NRG2P38082 220 aa1.63□□□□□ -2.15
SWM2YNR004W YBR096WP38256 230 aa1.63□□□□□ -2.15
SWM2YNR004W FAR7P43592 221 aa1.63□□□□□ -2.15
SWM2YNR004W IRC18P47056 224 aa1.63□□□□□ -2.15
SWM2YNR004W BRR6P53062 197 aa1.63□□□□□ -2.15
SWM2YNR004W PRM8P53174 237 aa1.63□□□□□ -2.15
SWM2YNR004W NOP13P53883 403 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
SWM2YNR004W ATG39Q06159 398 aa1.63□□□□□ -2.15
SWM2YNR004W HEM25Q07534 307 aa1.63□□□□□ -2.15
SWM2YNR004W YLR030WQ07967 263 aa1.63□□□□□ -2.15
SWM2YNR004W YLR126CQ12288 251 aa1.63□□□□□ -2.15
SWM2YNR004W COX5AP00424 153 aa1.62□□□□□ -2.15
SWM2YNR004W MSW1P04803 379 aa1.62□□□□□ -2.15
SWM2YNR004W DSF1P0CX08 502 aa1.62□□□□□ -2.15
SWM2YNR004W YNR073CP0CX09 502 aa1.62□□□□□ -2.15
SWM2YNR004W FCY2P17064 533 aa1.62□□□□□ -2.15
SWM2YNR004W CDC10P25342 322 aaKnown RBP1.62□□□□□ -2.15
SWM2YNR004W YCR102CP25608 368 aa1.62□□□□□ -2.15
SWM2YNR004W SVP26P38869 228 aa1.62□□□□□ -2.15
SWM2YNR004W YKE4P40544 346 aa1.62□□□□□ -2.15
SWM2YNR004W CAT5P41735 233 aa1.62□□□□□ -2.15
SWM2YNR004W YJR146WP47174 117 aa1.62□□□□□ -2.15
SWM2YNR004W YJR149WP47177 404 aa1.62□□□□□ -2.15
SWM2YNR004W YNL010WP53981 241 aaKnown RBP1.62□□□□□ -2.15
SWM2YNR004W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SWM2YNR004W THP2O13539 261 aaKnown RBP1.61□□□□□ -2.15
SWM2YNR004W URA6P15700 204 aa1.61□□□□□ -2.15
SWM2YNR004W PBN1P25580 416 aa1.61□□□□□ -2.15
SWM2YNR004W SKG1P36169 355 aa1.61□□□□□ -2.15
SWM2YNR004W RTR1P40084 226 aaPredicted RBP1.61□□□□□ -2.15
SWM2YNR004W YIL001WP40560 513 aa1.61□□□□□ -2.15
SWM2YNR004W YGL034CP53186 121 aa1.61□□□□□ -2.15
SWM2YNR004W CGR1P53188 120 aa1.61□□□□□ -2.15
SWM2YNR004W CAB4P53332 305 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms