RNA–Protein interactions for RNA: YNL131W

TOM22, Transcript of Component of the TOM (Translocase of Outer Membrane) complex, yeast

Gene TOM22, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOM22	YNL131W	SWI1	P09547	1314 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	VPS3	P23643	1011 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	TMA19	P35691	167 aa	Known RBP	0.66	□□□□□ -2.3
TOM22	YNL131W	YJR012C	P47087	207 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	YJR056C	P47115	236 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	PNC1	P53184	216 aa	Known RBP	0.66	□□□□□ -2.3
TOM22	YNL131W	GMC2	Q06201	188 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	YPL119C-A	Q3E751	87 aa		0.66	□□□□□ -2.3
TOM22	YNL131W	QCR8	P08525	94 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	MRX3	P38172	270 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	YER076C	P40049	302 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	RSM25	P40496	264 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	ICE2	P40499	491 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	RPL37B	P51402	88 aa	Known RBP	0.65	□□□□□ -2.31
TOM22	YNL131W	YMR007W	Q03675	126 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	YPR172W	Q06608	200 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	YPL257W	Q08974	193 aa		0.65	□□□□□ -2.31
TOM22	YNL131W	MEI4	P29467	408 aa		0.64	□□□□□ -2.31
TOM22	YNL131W	YKL070W	P36087	169 aa		0.64	□□□□□ -2.31
TOM22	YNL131W	HUA1	P40325	198 aa		0.64	□□□□□ -2.31
TOM22	YNL131W	RPL33B	P41056	107 aa	Known RBP	0.64	□□□□□ -2.31
TOM22	YNL131W	REX3	Q12090	404 aa		0.64	□□□□□ -2.31
TOM22	YNL131W	YKR104W	P0CE69	306 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	YPT52	P36018	234 aa	Known RBP	0.63	□□□□□ -2.31
TOM22	YNL131W	TIR3	P40552	269 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	ATG39	Q06159	398 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	YCT1	Q12235	531 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	MDY2	Q12285	212 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	FMP16	Q12497	93 aa		0.63	□□□□□ -2.31
TOM22	YNL131W	HIS1	P00498	297 aa	Known RBP	0.62	□□□□□ -2.31
TOM22	YNL131W	SSA3	P09435	649 aa	Known RBP	0.62	□□□□□ -2.31
TOM22	YNL131W	FZF1	P32805	299 aa		0.62	□□□□□ -2.31
TOM22	YNL131W	COA1	P40452	197 aa		0.62	□□□□□ -2.31
TOM22	YNL131W	AIM36	Q03798	255 aa		0.62	□□□□□ -2.31
TOM22	YNL131W	COQ10	Q08058	207 aa		0.62	□□□□□ -2.31
TOM22	YNL131W	RRP40	Q08285	240 aa	Known RBP	0.62	□□□□□ -2.31
TOM22	YNL131W	YOR186W	Q08560	144 aa		0.62	□□□□□ -2.31
TOM22	YNL131W	RSR1	P13856	272 aa		0.61	□□□□□ -2.31
TOM22	YNL131W	QRI5	P32344	111 aa		0.61	□□□□□ -2.31
TOM22	YNL131W	KAP114	P53067	1004 aa		0.61	□□□□□ -2.31
TOM22	YNL131W	MRPL39	P36533	70 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	BIG1	P38813	335 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	SNZ3	P43545	298 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	HAM1	P47119	197 aa	Known RBP	0.6	□□□□□ -2.31
TOM22	YNL131W	BOL2	P53082	120 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	SPG4	Q04438	115 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	ANT1	Q06497	328 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	YIL002W-A	Q3E7Z5	69 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	HTL1	Q9URQ5	78 aa		0.6	□□□□□ -2.31
TOM22	YNL131W	CYR1	P08678	2026 aa	Known RBP	0.6	□□□□□ -2.31
TOM22	YNL131W	KRR1	P25586	316 aa	Predicted RBP	0.59	□□□□□ -2.31
TOM22	YNL131W	EHD3	P28817	500 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	RRF1	P38771	230 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	RPF1	P38805	295 aa	Known RBP	0.59	□□□□□ -2.31
TOM22	YNL131W	YAR068W	P39564	161 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	YEL067C	P39978	195 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	YNL217W	P40152	326 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	RIO2	P40160	425 aa	Known RBP	0.59	□□□□□ -2.31
TOM22	YNL131W	RPA43	P46669	326 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	MPP6	P53725	186 aa	Predicted RBP	0.59	□□□□□ -2.31
TOM22	YNL131W	YOR020W-A	Q3E824	90 aa		0.59	□□□□□ -2.31
TOM22	YNL131W	STF1	P01098	86 aa		0.58	□□□□□ -2.32
TOM22	YNL131W	JEN1	P36035	616 aa		0.58	□□□□□ -2.32
TOM22	YNL131W	MRPL40	P36534	297 aa		0.58	□□□□□ -2.32
TOM22	YNL131W	PRS2	P38620	318 aa	Known RBP	0.58	□□□□□ -2.32
TOM22	YNL131W	SSK22	P25390	1331 aa	Predicted RBP	0.58	□□□□□ -2.32
TOM22	YNL131W	ECM33	P38248	429 aa	Known RBP	0.57	□□□□□ -2.32
TOM22	YNL131W	PGD1	P40356	397 aa		0.57	□□□□□ -2.32
TOM22	YNL131W	GPI8	P49018	411 aa		0.57	□□□□□ -2.32
TOM22	YNL131W	OST6	Q03723	332 aa		0.57	□□□□□ -2.32
TOM22	YNL131W	YPR098C	Q06089	161 aa		0.57	□□□□□ -2.32
TOM22	YNL131W	CDC8	P00572	216 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	IPP1	P00817	287 aa	Known RBP	0.56	□□□□□ -2.32
TOM22	YNL131W	RPL27B	P0C2H7	136 aa	Known RBP	0.56	□□□□□ -2.32
TOM22	YNL131W	TVP38	P36164	337 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	GOS1	P38736	223 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	MEP1	P40260	492 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	YNL046W	P53956	172 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	YLR413W	Q06689	675 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	NIP7	Q08962	181 aa	Known RBP	0.56	□□□□□ -2.32
TOM22	YNL131W	MSB2	P32334	1306 aa		0.56	□□□□□ -2.32
TOM22	YNL131W	NSP1	P14907	823 aa	Known RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	HOM6	P31116	359 aa	Known RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	GAA1	P39012	614 aa		0.55	□□□□□ -2.32
TOM22	YNL131W	SMB1	P40018	196 aa	Known RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	CUS2	P53830	285 aa	Predicted RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	ALG11	P53954	548 aa	Known RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	EGD1	Q02642	157 aa	Known RBP	0.55	□□□□□ -2.32
TOM22	YNL131W	YNL146C-A	Q3E7Z1	64 aa		0.55	□□□□□ -2.32
TOM22	YNL131W	AQY2	P0CD90	149 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	PBN1	P25580	416 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	SGE1	P33335	543 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	SAY1	P53324	424 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	SNZ2	P53824	298 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	YDL180W	Q12301	547 aa		0.54	□□□□□ -2.32
TOM22	YNL131W	COX2	P00410	251 aa		0.53	□□□□□ -2.32
TOM22	YNL131W	DBP3	P20447	523 aa	Known RBP	0.53	□□□□□ -2.32
TOM22	YNL131W	TFC1	P32367	649 aa		0.53	□□□□□ -2.32
TOM22	YNL131W	ILM1	P47155	203 aa		0.53	□□□□□ -2.32
TOM22	YNL131W	MSA1	Q08471	629 aa		0.53	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms