RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	CTR3	Q06686	241 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	RPS4A	P0CX35	261 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	RPS4B	P0CX36	261 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	SAC7	P17121	654 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	SRM1	P21827	482 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	MAK32	P23060	363 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	GEX1	P25596	615 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	PMI40	P29952	429 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	COX13	P32799	129 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	MNS1	P32906	549 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	SKN1	P33336	771 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	LOT5	P34234	306 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	COX15	P40086	486 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	AVT1	P47082	602 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	YNL034W	P53963	612 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	RCE1	Q03530	315 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	UTP15	Q04305	513 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	ERP1	Q05359	219 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	YPR027C	Q12079	277 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	HEM13	P11353	328 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	SLY41	P22215	453 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	PRO1	P32264	428 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	FMT1	P32785	401 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	RRT5	P43607	289 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	GTO3	Q04806	366 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	THI72	Q08579	599 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	ALG6	Q12001	544 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	TPT1	Q12272	230 aa	Known RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	SFG1	Q12507	346 aa		6.6	□□□□□ -1.35
AFG2	YLR397C	RPL13A	Q12690	199 aa	Predicted RBP	6.6	□□□□□ -1.35
AFG2	YLR397C	TIR1	P10863	254 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	EMP70	P32802	667 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	EMC3	P36039	253 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	YPT35	P38815	214 aa	Known RBP	6.59	□□□□□ -1.35
AFG2	YLR397C	YER085C	P40058	173 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	SMD3	P43321	101 aa	Known RBP	6.59	□□□□□ -1.35
AFG2	YLR397C	STE24	P47154	453 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	YIP3	P53633	176 aa		6.59	□□□□□ -1.35
AFG2	YLR397C	FOL3	Q12676	427 aa	Predicted RBP	6.59	□□□□□ -1.35
AFG2	YLR397C	PAI3	P01094	68 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	MRS4	P23500	304 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	CNE1	P27825	502 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	THI80	P35202	319 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	TAT2	P38967	592 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	GPP1	P41277	250 aa	Known RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	RSM7	P47150	247 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	YJR120W	P47157	116 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	MGA1	P53050	456 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	BOR1	P53838	576 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	FRK1	Q03002	865 aa	Predicted RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	HLR1	Q04429	423 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	HRI1	Q05905	244 aa	Known RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	YLR346C	Q06139	101 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	YPR174C	Q06616	221 aa	Predicted RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	LEA1	Q08963	238 aa	Predicted RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	HUT1	Q12520	339 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	SCS22	Q6Q595	175 aa		6.59	□□□□□ -1.36
AFG2	YLR397C	DET1	Q99288	334 aa	Known RBP	6.59	□□□□□ -1.36
AFG2	YLR397C	ESS1	P22696	170 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	YCR099C	P25657	155 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	ARC40	P38328	384 aa	Known RBP	6.58	□□□□□ -1.36
AFG2	YLR397C	MOB1	P40484	314 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	TES1	P41903	349 aa	Known RBP	6.58	□□□□□ -1.36
AFG2	YLR397C	MTQ2	Q03920	221 aa	Predicted RBP	6.58	□□□□□ -1.36
AFG2	YLR397C	CDD1	Q06549	142 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	YDL157C	Q12082	118 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	YOR015W	Q12169	119 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	MSF1	P08425	469 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	PBN1	P25580	416 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	DCG1	P32460	244 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	ALK2	P32789	676 aa	Predicted RBP	6.58	□□□□□ -1.36
AFG2	YLR397C	YHR130C	P38834	111 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	CTF8	P38877	133 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	NIT1	P40447	199 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	ERJ5	P43613	295 aa	Predicted RBP	6.58	□□□□□ -1.36
AFG2	YLR397C	MUP1	P50276	574 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	IBD2	P53892	351 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	YLR446W	Q06204	433 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	PAU23	Q07987	124 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	PAU17	Q12370	124 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	COX19	Q3E731	98 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	IZH4	Q99393	312 aa		6.58	□□□□□ -1.36
AFG2	YLR397C	COX1	P00401	534 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	URK1	P27515	501 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	SEC17	P32602	292 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	YSC83	P32792	385 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	DAD2	P36162	133 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	WSC4	P38739	605 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	YNL198C	P40166	100 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	LTP1	P40347	161 aa		6.57	□□□□□ -1.36
AFG2	YLR397C	RMD9	P53140	646 aa	Known RBP	6.57	□□□□□ -1.36
AFG2	YLR397C	QCR7	P00128	127 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	PAU19	P0CE85	124 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	PAU21	P0CE86	164 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	PAU22	P0CE87	164 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	TY2A-F	P0CX61	438 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	TY2A-GR2	P0CX62	438 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	INO4	P13902	151 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	MCK1	P21965	375 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	LRE1	P25579	583 aa	Known RBP	6.56	□□□□□ -1.36

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