RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSL1	YLR005W	RMR1	P53060	241 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	NRK1	P53915	240 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	MRPL13	Q02204	264 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	PRP3	Q03338	469 aa	Predicted RBP	3.18	□□□□□ -1.9
SSL1	YLR005W	OST6	Q03723	332 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	ARR2	Q06597	130 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	AIM6	Q07716	390 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	FCY22	Q12119	530 aa		3.18	□□□□□ -1.9
SSL1	YLR005W	RAD52	P06778	471 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	YGL041W-A	P0C5N3	154 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	RPL30	P14120	105 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	FBA1	P14540	359 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	FUN19	P28003	413 aa	Predicted RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	SSE2	P32590	693 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	TMA19	P35691	167 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	FRM2	P37261	193 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	PEX32	P38292	413 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	IPT1	P38954	527 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	PSD1	P39006	500 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	RMD6	P39975	231 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	HMS2	P47175	358 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	PXR1	P53335	271 aa	Predicted RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	PGA1	P53896	198 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	COG5	P53951	403 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	ECM18	Q04623	453 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	GAL83	Q04739	417 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	YMR254C	Q04838	102 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	GRC3	Q07845	632 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	FRE3	Q08905	711 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	THP3	Q12049	470 aa	Known RBP	3.17	□□□□□ -1.9
SSL1	YLR005W	PCL9	Q12477	304 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	RIB3	Q99258	208 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	VCX1	Q99385	411 aa		3.17	□□□□□ -1.9
SSL1	YLR005W	TPK3	P05986	398 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	SAG1	P20840	650 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	HXT2	P23585	541 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	ELO2	P25358	347 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	AFG1	P32317	509 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	DPH5	P32469	300 aa	Predicted RBP	3.16	□□□□□ -1.9
SSL1	YLR005W	ECT1	P33412	323 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	SOR1	P35497	357 aa	Known RBP	3.16	□□□□□ -1.9
SSL1	YLR005W	THI2	P38141	450 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	TCM62	P38228	572 aa	Known RBP	3.16	□□□□□ -1.9
SSL1	YLR005W	YLF2	P38746	405 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	SLM1	P40485	686 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	AGP3	P43548	558 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	CCC1	P47818	322 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	VOA1	P53262	265 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	WSC2	P53832	503 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	AAH1	P53909	347 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	ASI3	P53983	676 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	YDR239C	Q03780	787 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	ARP10	Q04549	284 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	YMR315W	Q04869	349 aa	Known RBP	3.16	□□□□□ -1.9
SSL1	YLR005W	TRI1	Q05024	226 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	LUC7	Q07508	261 aa	Predicted RBP	3.16	□□□□□ -1.9
SSL1	YLR005W	SOR2	Q07786	357 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	YLR126C	Q12288	251 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	ISA2	Q12425	185 aa		3.16	□□□□□ -1.9
SSL1	YLR005W	GDH1	P07262	454 aa	Known RBP	3.15	□□□□□ -1.9
SSL1	YLR005W	SGA1	P08019	549 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	PCL1	P24867	279 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	ANR2	P36090	516 aa	Predicted RBP	3.15	□□□□□ -1.9
SSL1	YLR005W	NAT2	P37293	288 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	ECM31	P38122	312 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	CIN4	P39110	191 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	TIR3	P40552	269 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	GON7	P46984	123 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	PMT5	P52867	743 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	YGL114W	P53134	725 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	MRH4	P53166	561 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	APJ1	P53940	528 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	YKR005C	Q02203	525 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	LIP2	Q06005	328 aa		3.15	□□□□□ -1.9
SSL1	YLR005W	AAC1	P04710	309 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	OAC1	P32332	324 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	ZUO1	P32527	433 aa	Known RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	SWD2	P36104	329 aa	Predicted RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	DLS1	P40366	167 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	SCW4	P53334	386 aa	Known RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	RNH201	P53942	307 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	UTP15	Q04305	513 aa	Known RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	YMR226C	Q05016	267 aa	Known RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	CRC1	Q12289	327 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	PST2	Q12335	198 aa	Known RBP	3.14	□□□□□ -1.91
SSL1	YLR005W	YMR105W-A	Q8TGS8	64 aa		3.14	□□□□□ -1.91
SSL1	YLR005W	BGL2	P15703	313 aa	Known RBP	3.13	□□□□□ -1.91
SSL1	YLR005W	PHO85	P17157	305 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	UBC8	P28263	218 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	YCR041W	P37265	110 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	PDX3	P38075	228 aa	Known RBP	3.13	□□□□□ -1.91
SSL1	YLR005W	CUE1	P38428	203 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	YER079W	P40052	210 aa	Known RBP	3.13	□□□□□ -1.91
SSL1	YLR005W	AGE2	P40529	298 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	SWP82	P43554	623 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	PIR5	P46999	287 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	EFM3	P47163	339 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	AVT4	P50944	713 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	YGL159W	P53110	370 aa		3.13	□□□□□ -1.91
SSL1	YLR005W	OKP1	P53298	406 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms