RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C MATALPHA2P0CY08 210 aa1.65□□□□□ -2.15
UBP11YKR098C HMLALPHA2P0CY09 210 aa1.65□□□□□ -2.15
UBP11YKR098C URA6P15700 204 aa1.65□□□□□ -2.15
UBP11YKR098C YPK2P18961 677 aa1.65□□□□□ -2.15
UBP11YKR098C SEC22P22214 214 aa1.65□□□□□ -2.15
UBP11YKR098C TKL2P33315 681 aa1.65□□□□□ -2.15
UBP11YKR098C AST1P35183 429 aa1.65□□□□□ -2.15
UBP11YKR098C PRY2P36110 329 aa1.65□□□□□ -2.15
UBP11YKR098C YER189WP40104 122 aa1.65□□□□□ -2.15
UBP11YKR098C YIR035CP40579 254 aa1.65□□□□□ -2.15
UBP11YKR098C NUP57P48837 541 aa1.65□□□□□ -2.15
UBP11YKR098C YRA1Q12159 226 aaKnown RBP1.65□□□□□ -2.15
UBP11YKR098C SAC3P46674 1301 aa1.65□□□□□ -2.15
UBP11YKR098C RPS23AP0CX29 145 aaKnown RBP1.64□□□□□ -2.15
UBP11YKR098C RPS23BP0CX30 145 aa1.64□□□□□ -2.15
UBP11YKR098C CBF1P17106 351 aa1.64□□□□□ -2.15
UBP11YKR098C RFA3P26755 122 aaKnown RBP1.64□□□□□ -2.15
UBP11YKR098C RNP1P32385 249 aa1.64□□□□□ -2.15
UBP11YKR098C IKI1P38874 309 aa1.64□□□□□ -2.15
UBP11YKR098C YIL059CP40520 121 aa1.64□□□□□ -2.15
UBP11YKR098C BRR6P53062 197 aa1.64□□□□□ -2.15
UBP11YKR098C FYV6P53913 173 aa1.64□□□□□ -2.15
UBP11YKR098C SNZ1Q03148 297 aa1.64□□□□□ -2.15
UBP11YKR098C YLR179CQ06252 201 aaKnown RBP1.64□□□□□ -2.15
UBP11YKR098C YPR172WQ06608 200 aa1.64□□□□□ -2.15
UBP11YKR098C SLD7Q08457 257 aa1.64□□□□□ -2.15
UBP11YKR098C PST1Q12355 444 aa1.64□□□□□ -2.15
UBP11YKR098C AGC1Q12482 902 aa1.64□□□□□ -2.15
UBP11YKR098C YDL012CQ12489 107 aa1.64□□□□□ -2.15
UBP11YKR098C YCL012CQ8J0M4 134 aa1.64□□□□□ -2.15
UBP11YKR098C YHR139C-AO13536 103 aa1.64□□□□□ -2.15
UBP11YKR098C HIS3P06633 220 aa1.64□□□□□ -2.15
UBP11YKR098C IDH1P28834 360 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
UBP11YKR098C AGA2P32781 87 aa1.64□□□□□ -2.15
UBP11YKR098C ECM14P38836 430 aa1.64□□□□□ -2.15
UBP11YKR098C PEX17P40155 199 aa1.64□□□□□ -2.15
UBP11YKR098C PFS2P42841 465 aaKnown RBP1.64□□□□□ -2.15
UBP11YKR098C SYF2P53277 215 aaPredicted RBP1.64□□□□□ -2.15
UBP11YKR098C GEP5Q12393 293 aa1.64□□□□□ -2.15
UBP11YKR098C MRX4Q12467 430 aa1.64□□□□□ -2.15
UBP11YKR098C TUS1Q06412 1307 aa1.63□□□□□ -2.15
UBP11YKR098C YLR462WO13556 202 aa1.63□□□□□ -2.15
UBP11YKR098C COX5AP00424 153 aa1.63□□□□□ -2.15
UBP11YKR098C HTB1P02293 131 aaKnown RBP1.63□□□□□ -2.15
UBP11YKR098C HTB2P02294 131 aa1.63□□□□□ -2.15
UBP11YKR098C APA2P22108 325 aa1.63□□□□□ -2.15
UBP11YKR098C MSA2P36157 363 aa1.63□□□□□ -2.15
UBP11YKR098C YEL075CP39972 122 aa1.63□□□□□ -2.15
UBP11YKR098C IRC18P47056 224 aa1.63□□□□□ -2.15
UBP11YKR098C YGL159WP53110 370 aa1.63□□□□□ -2.15
UBP11YKR098C FAR8Q05040 523 aa1.63□□□□□ -2.15
UBP11YKR098C YLR030WQ07967 263 aa1.63□□□□□ -2.15
UBP11YKR098C IES4Q08561 116 aa1.63□□□□□ -2.15
UBP11YKR098C ABP140Q08641 628 aaKnown RBP1.63□□□□□ -2.15
UBP11YKR098C SGA1P08019 549 aa1.62□□□□□ -2.15
UBP11YKR098C ASF2P32448 525 aaPredicted RBP1.62□□□□□ -2.15
UBP11YKR098C CAT5P41735 233 aa1.62□□□□□ -2.15
UBP11YKR098C NOP19P53317 196 aaPredicted RBP1.62□□□□□ -2.15
UBP11YKR098C RAD9P14737 1309 aa1.62□□□□□ -2.15
UBP11YKR098C CDC28P00546 298 aaKnown RBP1.62□□□□□ -2.15
UBP11YKR098C IPP1P00817 287 aaKnown RBP1.62□□□□□ -2.15
UBP11YKR098C RAD10P06838 210 aa1.62□□□□□ -2.15
UBP11YKR098C MET2P08465 486 aa1.62□□□□□ -2.15
UBP11YKR098C DBF2P22204 572 aa1.62□□□□□ -2.15
UBP11YKR098C YRB2P40517 327 aa1.62□□□□□ -2.15
UBP11YKR098C BXI1P48558 297 aa1.62□□□□□ -2.15
UBP11YKR098C ERV29P53337 310 aa1.62□□□□□ -2.15
UBP11YKR098C RSM10Q03201 203 aa1.62□□□□□ -2.15
UBP11YKR098C QCR7P00128 127 aa1.61□□□□□ -2.15
UBP11YKR098C RPL27AP0C2H6 136 aaKnown RBP1.61□□□□□ -2.15
UBP11YKR098C RPL27BP0C2H7 136 aaKnown RBP1.61□□□□□ -2.15
UBP11YKR098C MER1P16523 270 aa1.61□□□□□ -2.15
UBP11YKR098C ADE1P27616 306 aa1.61□□□□□ -2.15
UBP11YKR098C FMT1P32785 401 aa1.61□□□□□ -2.15
UBP11YKR098C YER084WP40057 128 aa1.61□□□□□ -2.15
UBP11YKR098C BMT5P40493 336 aa1.61□□□□□ -2.15
UBP11YKR098C RPA43P46669 326 aa1.61□□□□□ -2.15
UBP11YKR098C ILM1P47155 203 aa1.61□□□□□ -2.15
UBP11YKR098C PDR17P53844 350 aa1.61□□□□□ -2.15
UBP11YKR098C INM2Q05533 292 aa1.61□□□□□ -2.15
UBP11YKR098C YOR268CQ08734 132 aa1.61□□□□□ -2.15
UBP11YKR098C ERG24P32462 438 aaKnown RBP1.61□□□□□ -2.15
UBP11YKR098C RCN1P36054 211 aa1.61□□□□□ -2.15
UBP11YKR098C YCR087C-AP37263 153 aa1.61□□□□□ -2.15
UBP11YKR098C BUD13P46947 266 aaPredicted RBP1.61□□□□□ -2.15
UBP11YKR098C PIR5P46999 287 aa1.61□□□□□ -2.15
UBP11YKR098C GET1P53192 235 aa1.61□□□□□ -2.15
UBP11YKR098C GTR2P53290 341 aa1.61□□□□□ -2.15
UBP11YKR098C YDR248CQ03786 193 aa1.61□□□□□ -2.15
UBP11YKR098C YPR195CQ06594 109 aa1.61□□□□□ -2.15
UBP11YKR098C NIP7Q08962 181 aaKnown RBP1.61□□□□□ -2.15
UBP11YKR098C HTL1Q9URQ5 78 aa1.61□□□□□ -2.15
UBP11YKR098C DSF1P0CX08 502 aa1.6□□□□□ -2.15
UBP11YKR098C YNR073CP0CX09 502 aa1.6□□□□□ -2.15
UBP11YKR098C OAC1P32332 324 aa1.6□□□□□ -2.15
UBP11YKR098C YGP1P38616 354 aaKnown RBP1.6□□□□□ -2.15
UBP11YKR098C COS8P38723 381 aa1.6□□□□□ -2.15
UBP11YKR098C RPF1P38805 295 aaKnown RBP1.6□□□□□ -2.15
UBP11YKR098C GON7P46984 123 aa1.6□□□□□ -2.15
UBP11YKR098C DID2P69771 204 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms