RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C GIS3Q12418 502 aa2.83□□□□□ -1.96
XRN1YGL173C BI3Q9ZZW7 517 aa2.83□□□□□ -1.96
XRN1YGL173C PEX17P40155 199 aa2.83□□□□□ -1.96
XRN1YGL173C CIN5P40917 295 aa2.83□□□□□ -1.96
XRN1YGL173C PEX31P53203 462 aa2.83□□□□□ -1.96
XRN1YGL173C PGA1P53896 198 aa2.83□□□□□ -1.96
XRN1YGL173C LSM7P53905 115 aaKnown RBP2.83□□□□□ -1.96
XRN1YGL173C PEX30Q06169 523 aa2.83□□□□□ -1.96
XRN1YGL173C FCF2Q12035 217 aaPredicted RBP2.83□□□□□ -1.96
XRN1YGL173C MSI1P13712 422 aa2.83□□□□□ -1.96
XRN1YGL173C SPS19P32573 292 aaKnown RBP2.83□□□□□ -1.96
XRN1YGL173C RPH1P39956 796 aa2.83□□□□□ -1.96
XRN1YGL173C PCI8P40512 444 aa2.83□□□□□ -1.96
XRN1YGL173C YIL067CP40514 678 aa2.83□□□□□ -1.96
XRN1YGL173C MRM2P53123 320 aa2.83□□□□□ -1.96
XRN1YGL173C RAD50P12753 1312 aa2.83□□□□□ -1.96
XRN1YGL173C SNF4P12904 322 aa2.83□□□□□ -1.96
XRN1YGL173C APA2P22108 325 aa2.83□□□□□ -1.96
XRN1YGL173C PPH21P23594 369 aa2.83□□□□□ -1.96
XRN1YGL173C YER189WP40104 122 aa2.83□□□□□ -1.96
XRN1YGL173C YJL118WP47022 219 aa2.83□□□□□ -1.96
XRN1YGL173C YIP3P53633 176 aa2.83□□□□□ -1.96
XRN1YGL173C CCE1Q03702 353 aa2.83□□□□□ -1.96
XRN1YGL173C MPD1Q12404 318 aaKnown RBP2.83□□□□□ -1.96
XRN1YGL173C MRX4Q12467 430 aa2.83□□□□□ -1.96
XRN1YGL173C YER145C-AA0A023PYF4 145 aa2.82□□□□□ -1.96
XRN1YGL173C CBP6P07253 162 aaPredicted RBP2.82□□□□□ -1.96
XRN1YGL173C JEN1P36035 616 aa2.82□□□□□ -1.96
XRN1YGL173C PMU1P36069 295 aa2.82□□□□□ -1.96
XRN1YGL173C ECM33P38248 429 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C MIC12P38341 106 aa2.82□□□□□ -1.96
XRN1YGL173C RRG9P40156 214 aa2.82□□□□□ -1.96
XRN1YGL173C YIA6P40556 373 aa2.82□□□□□ -1.96
XRN1YGL173C PHO23P50947 330 aa2.82□□□□□ -1.96
XRN1YGL173C TDA7P53882 636 aaPredicted RBP2.82□□□□□ -1.96
XRN1YGL173C YLR152CP54072 576 aa2.82□□□□□ -1.96
XRN1YGL173C YMR010WQ03687 405 aa2.82□□□□□ -1.96
XRN1YGL173C YML096WQ04489 525 aa2.82□□□□□ -1.96
XRN1YGL173C RIF2Q06208 395 aa2.82□□□□□ -1.96
XRN1YGL173C CTR3Q06686 241 aa2.82□□□□□ -1.96
XRN1YGL173C YPL229WQ99395 206 aa2.82□□□□□ -1.96
XRN1YGL173C CMD1P06787 147 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C MCK1P21965 375 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C CDC10P25342 322 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C YPT52P36018 234 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C YJL016WP47072 561 aa2.82□□□□□ -1.96
XRN1YGL173C YGR015CP53208 328 aa2.82□□□□□ -1.96
XRN1YGL173C ADD37Q03233 198 aa2.82□□□□□ -1.96
XRN1YGL173C CDC42P19073 191 aa2.82□□□□□ -1.96
XRN1YGL173C DER1P38307 211 aa2.82□□□□□ -1.96
XRN1YGL173C WSC4P38739 605 aa2.82□□□□□ -1.96
XRN1YGL173C YHR127WP38833 243 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C NVJ1P38881 321 aa2.82□□□□□ -1.96
XRN1YGL173C GND2P53319 492 aa2.82□□□□□ -1.96
XRN1YGL173C MPA43P53583 542 aaPredicted RBP2.82□□□□□ -1.96
XRN1YGL173C GPI17Q04080 534 aa2.82□□□□□ -1.96
XRN1YGL173C PBP4Q07362 185 aaKnown RBP2.82□□□□□ -1.96
XRN1YGL173C YDR157WA0A023PZE8 133 aa2.81□□□□□ -1.96
XRN1YGL173C PHO80P20052 293 aa2.81□□□□□ -1.96
XRN1YGL173C YNL194CP40169 301 aa2.81□□□□□ -1.96
XRN1YGL173C YGL159WP53110 370 aa2.81□□□□□ -1.96
XRN1YGL173C MMS2P53152 137 aa2.81□□□□□ -1.96
XRN1YGL173C CWC25P53854 179 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C DPP1Q05521 289 aa2.81□□□□□ -1.96
XRN1YGL173C ORM2Q06144 216 aa2.81□□□□□ -1.96
XRN1YGL173C YLR030WQ07967 263 aa2.81□□□□□ -1.96
XRN1YGL173C MCA1Q08601 432 aa2.81□□□□□ -1.96
XRN1YGL173C YOR387CQ08910 206 aa2.81□□□□□ -1.96
XRN1YGL173C HMS1Q12398 434 aa2.81□□□□□ -1.96
XRN1YGL173C YLR412C-AQ3E742 68 aa2.81□□□□□ -1.96
XRN1YGL173C CKA2P19454 339 aa2.81□□□□□ -1.96
XRN1YGL173C MAK31P23059 88 aa2.81□□□□□ -1.96
XRN1YGL173C APS1P35181 156 aa2.81□□□□□ -1.96
XRN1YGL173C PDS1P40316 373 aaPredicted RBP2.81□□□□□ -1.96
XRN1YGL173C HYR1P40581 163 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C AVT4P50944 713 aa2.81□□□□□ -1.96
XRN1YGL173C NQM1P53228 333 aaPredicted RBP2.81□□□□□ -1.96
XRN1YGL173C TMA20P89886 181 aaPredicted RBP2.81□□□□□ -1.96
XRN1YGL173C YPL225WQ08971 146 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C AHC2P25649 128 aa2.81□□□□□ -1.96
XRN1YGL173C PMT2P31382 759 aa2.81□□□□□ -1.96
XRN1YGL173C RME1P32338 300 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C SRY1P36007 326 aa2.81□□□□□ -1.96
XRN1YGL173C CBT1P36038 271 aaPredicted RBP2.81□□□□□ -1.96
XRN1YGL173C GAB1P41733 394 aa2.81□□□□□ -1.96
XRN1YGL173C YGL088WP53151 121 aa2.81□□□□□ -1.96
XRN1YGL173C ACT1P60010 375 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C RMI1Q02685 241 aa2.81□□□□□ -1.96
XRN1YGL173C YPL080CQ02826 108 aa2.81□□□□□ -1.96
XRN1YGL173C SPC24Q04477 213 aa2.81□□□□□ -1.96
XRN1YGL173C DYN3Q04949 312 aa2.81□□□□□ -1.96
XRN1YGL173C YDL180WQ12301 547 aa2.81□□□□□ -1.96
XRN1YGL173C YNL162W-AQ3E7A8 72 aa2.81□□□□□ -1.96
XRN1YGL173C YCR024C-BQ3E7Z8 88 aa2.81□□□□□ -1.96
XRN1YGL173C YLR462WO13556 202 aa2.81□□□□□ -1.96
XRN1YGL173C CDC8P00572 216 aa2.81□□□□□ -1.96
XRN1YGL173C SPT15P13393 240 aaKnown RBP2.81□□□□□ -1.96
XRN1YGL173C MRP21P38175 177 aa2.81□□□□□ -1.96
XRN1YGL173C YEL075CP39972 122 aa2.81□□□□□ -1.96
XRN1YGL173C RMD6P39975 231 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms