RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W YDR391CQ04170 232 aa3.56□□□□□ -1.84
UBP6YFR010W YMR253CQ04835 414 aa3.56□□□□□ -1.84
UBP6YFR010W NKP2Q06162 153 aa3.56□□□□□ -1.84
UBP6YFR010W PEX30Q06169 523 aa3.56□□□□□ -1.84
UBP6YFR010W CAP2P13517 287 aa3.55□□□□□ -1.84
UBP6YFR010W PHO13P19881 312 aa3.55□□□□□ -1.84
UBP6YFR010W ALK2P32789 676 aaPredicted RBP3.55□□□□□ -1.84
UBP6YFR010W TIR2P33890 251 aa3.55□□□□□ -1.84
UBP6YFR010W COS8P38723 381 aa3.55□□□□□ -1.84
UBP6YFR010W DOG2P38773 246 aa3.55□□□□□ -1.84
UBP6YFR010W DOG1P38774 246 aa3.55□□□□□ -1.84
UBP6YFR010W TRR2P38816 342 aa3.55□□□□□ -1.84
UBP6YFR010W TES1P41903 349 aaKnown RBP3.55□□□□□ -1.84
UBP6YFR010W BUD4P47136 1447 aa3.55□□□□□ -1.84
UBP6YFR010W AVT4P50944 713 aa3.55□□□□□ -1.84
UBP6YFR010W FRE4P53746 719 aa3.55□□□□□ -1.84
UBP6YFR010W SUR7P54003 302 aa3.55□□□□□ -1.84
UBP6YFR010W YPL113CQ02961 396 aa3.55□□□□□ -1.84
UBP6YFR010W SCS7Q03529 384 aa3.55□□□□□ -1.84
UBP6YFR010W BET5Q03630 159 aa3.55□□□□□ -1.84
UBP6YFR010W HPT1Q04178 221 aaKnown RBP3.55□□□□□ -1.84
UBP6YFR010W CNL1Q06333 122 aa3.55□□□□□ -1.84
UBP6YFR010W MCT1Q12283 360 aa3.55□□□□□ -1.84
UBP6YFR010W GEP5Q12393 293 aa3.55□□□□□ -1.84
UBP6YFR010W TSC11P40061 1430 aa3.55□□□□□ -1.84
UBP6YFR010W BI2P03873 423 aa3.54□□□□□ -1.84
UBP6YFR010W PBI2P0CT04 75 aaKnown RBP3.54□□□□□ -1.84
UBP6YFR010W GPA2P10823 449 aa3.54□□□□□ -1.84
UBP6YFR010W MDM10P18409 493 aa3.54□□□□□ -1.84
UBP6YFR010W SEC14P24280 304 aaKnown RBP3.54□□□□□ -1.84
UBP6YFR010W YCR006CP25350 157 aa3.54□□□□□ -1.84
UBP6YFR010W YCR007CP25354 239 aa3.54□□□□□ -1.84
UBP6YFR010W YCR090CP25654 182 aaKnown RBP3.54□□□□□ -1.84
UBP6YFR010W CDC50P25656 391 aa3.54□□□□□ -1.84
UBP6YFR010W AEP1P32493 518 aa3.54□□□□□ -1.84
UBP6YFR010W PDC2P32896 925 aa3.54□□□□□ -1.84
UBP6YFR010W YIL169CP40442 995 aa3.54□□□□□ -1.84
UBP6YFR010W SER2P42941 309 aa3.54□□□□□ -1.84
UBP6YFR010W HST4P53688 370 aa3.54□□□□□ -1.84
UBP6YFR010W TRM12Q04235 462 aa3.54□□□□□ -1.84
UBP6YFR010W SPG4Q04438 115 aa3.54□□□□□ -1.84
UBP6YFR010W TAF9Q05027 157 aa3.54□□□□□ -1.84
UBP6YFR010W FDH1Q08911 376 aa3.54□□□□□ -1.84
UBP6YFR010W YAL064W-BO13512 126 aa3.54□□□□□ -1.84
UBP6YFR010W YKR104WP0CE69 306 aa3.54□□□□□ -1.84
UBP6YFR010W SPS100P13130 326 aa3.54□□□□□ -1.84
UBP6YFR010W PEX34P25584 144 aa3.54□□□□□ -1.84
UBP6YFR010W AHC2P25649 128 aa3.54□□□□□ -1.84
UBP6YFR010W SNC1P31109 117 aa3.54□□□□□ -1.84
UBP6YFR010W PHA2P32452 334 aa3.54□□□□□ -1.84
UBP6YFR010W SHE2P36068 246 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
UBP6YFR010W PAN3P36102 679 aaPredicted RBP3.54□□□□□ -1.84
UBP6YFR010W SPL2P38839 148 aa3.54□□□□□ -1.84
UBP6YFR010W YEA4P40004 342 aa3.54□□□□□ -1.84
UBP6YFR010W DFG10P40526 253 aa3.54□□□□□ -1.84
UBP6YFR010W YFL015CP43578 164 aa3.54□□□□□ -1.84
UBP6YFR010W AIM25P47140 327 aa3.54□□□□□ -1.84
UBP6YFR010W SOL1P50278 321 aa3.54□□□□□ -1.84
UBP6YFR010W FLC3P53121 802 aa3.54□□□□□ -1.84
UBP6YFR010W ATP23P53722 227 aa3.54□□□□□ -1.84
UBP6YFR010W YNR048WP53740 393 aa3.54□□□□□ -1.84
UBP6YFR010W PET191Q02772 108 aa3.54□□□□□ -1.84
UBP6YFR010W YET2Q04210 160 aa3.54□□□□□ -1.84
UBP6YFR010W YMR317WQ04893 1140 aa3.54□□□□□ -1.84
UBP6YFR010W YLR446WQ06204 433 aa3.54□□□□□ -1.84
UBP6YFR010W HRT3Q12347 344 aa3.54□□□□□ -1.84
UBP6YFR010W RPL7AP05737 244 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W SEC4P07560 215 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W UBI4P0CG63 381 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W RPL2AP0CX45 254 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W RPL2BP0CX46 254 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W ERD2P18414 219 aa3.53□□□□□ -1.84
UBP6YFR010W ILV6P25605 309 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W YMC1P32331 307 aa3.53□□□□□ -1.84
UBP6YFR010W ERG24P32462 438 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W YMC2P38087 329 aa3.53□□□□□ -1.84
UBP6YFR010W RPS20P38701 121 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W AIM2P39721 246 aa3.53□□□□□ -1.84
UBP6YFR010W ERV46P39727 415 aa3.53□□□□□ -1.84
UBP6YFR010W YNL320WP42840 284 aa3.53□□□□□ -1.84
UBP6YFR010W ORC5P50874 479 aa3.53□□□□□ -1.84
UBP6YFR010W ARO8P53090 500 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W ARK1P53974 638 aa3.53□□□□□ -1.84
UBP6YFR010W LIP2Q06005 328 aa3.53□□□□□ -1.84
UBP6YFR010W RPL7BQ12213 244 aaKnown RBP3.53□□□□□ -1.84
UBP6YFR010W YGK3Q12222 375 aaPredicted RBP3.53□□□□□ -1.84
UBP6YFR010W YLR099W-AQ3E798 87 aa3.53□□□□□ -1.84
UBP6YFR010W SFC1P33303 322 aa3.52□□□□□ -1.85
UBP6YFR010W APS1P35181 156 aa3.52□□□□□ -1.85
UBP6YFR010W BAT1P38891 393 aaKnown RBP3.52□□□□□ -1.85
UBP6YFR010W AYR1P40471 297 aa3.52□□□□□ -1.85
UBP6YFR010W XBP1P40489 647 aa3.52□□□□□ -1.85
UBP6YFR010W YAE1P47118 141 aaPredicted RBP3.52□□□□□ -1.85
UBP6YFR010W RPS12P48589 143 aaKnown RBP3.52□□□□□ -1.85
UBP6YFR010W COF1Q03048 143 aaKnown RBP3.52□□□□□ -1.85
UBP6YFR010W DIC1Q06143 298 aa3.52□□□□□ -1.85
UBP6YFR010W ATG39Q06159 398 aa3.52□□□□□ -1.85
UBP6YFR010W SHH4Q06236 168 aa3.52□□□□□ -1.85
UBP6YFR010W LOA1Q06508 300 aa3.52□□□□□ -1.85
UBP6YFR010W SLM3Q12093 417 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms