RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	UIP3	P39547	235 aa		3.14	□□□□□ -1.91
RAD4	YER162C	YER079W	P40052	210 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	TAD2	P47058	250 aa		3.14	□□□□□ -1.91
RAD4	YER162C	NRK1	P53915	240 aa		3.14	□□□□□ -1.91
RAD4	YER162C	PLP1	Q04004	230 aa		3.14	□□□□□ -1.91
RAD4	YER162C	SEC13	Q04491	297 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	ARR3	Q06598	404 aa		3.14	□□□□□ -1.91
RAD4	YER162C	SOR2	Q07786	357 aa		3.14	□□□□□ -1.91
RAD4	YER162C	AHA1	Q12449	350 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	HTZ1	Q12692	134 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	YER175W-A	Q8TGU4	54 aa		3.14	□□□□□ -1.91
RAD4	YER162C	RPL15A	P05748	204 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	CBP6	P07253	162 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	MET2	P08465	486 aa		3.14	□□□□□ -1.91
RAD4	YER162C	RPL20A	P0CX23	172 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	RPL20B	P0CX24	172 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	PRE7	P23724	241 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	SUA7	P29055	345 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	FUN26	P31381	517 aa		3.14	□□□□□ -1.91
RAD4	YER162C	OCH1	P31755	480 aa		3.14	□□□□□ -1.91
RAD4	YER162C	MSN2	P33748	704 aa		3.14	□□□□□ -1.91
RAD4	YER162C	SRL3	P36167	246 aa		3.14	□□□□□ -1.91
RAD4	YER162C	SCO2	P38072	301 aa		3.14	□□□□□ -1.91
RAD4	YER162C	TRR2	P38816	342 aa		3.14	□□□□□ -1.91
RAD4	YER162C	PRE6	P40303	254 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	ALG13	P53178	202 aa		3.14	□□□□□ -1.91
RAD4	YER162C	RPL15B	P54780	204 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	NOC4	Q06512	552 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	LDS2	Q08218	356 aa		3.14	□□□□□ -1.91
RAD4	YER162C	DCN1	Q12395	269 aa		3.14	□□□□□ -1.91
RAD4	YER162C	YMR030W-A	Q3E760	96 aa		3.14	□□□□□ -1.91
RAD4	YER162C	HEM2	P05373	342 aa		3.13	□□□□□ -1.91
RAD4	YER162C	ERS1	P17261	260 aa		3.13	□□□□□ -1.91
RAD4	YER162C	IFM1	P25038	676 aa		3.13	□□□□□ -1.91
RAD4	YER162C	INO2	P26798	304 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YKR073C	P36153	106 aa		3.13	□□□□□ -1.91
RAD4	YER162C	PTH1	P38876	190 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	CIN4	P39110	191 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YER076C	P40049	302 aa		3.13	□□□□□ -1.91
RAD4	YER162C	BRR6	P53062	197 aa		3.13	□□□□□ -1.91
RAD4	YER162C	USE1	P53146	245 aa		3.13	□□□□□ -1.91
RAD4	YER162C	MSO1	P53604	210 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	HEM25	Q07534	307 aa		3.13	□□□□□ -1.91
RAD4	YER162C	RNH203	Q12338	110 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YOR304C-A	O14468	76 aa		3.13	□□□□□ -1.91
RAD4	YER162C	REP1	P03871	373 aa		3.13	□□□□□ -1.91
RAD4	YER162C	CTA1	P15202	515 aa		3.13	□□□□□ -1.91
RAD4	YER162C	RNA14	P25298	677 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	KAR4	P25583	335 aa		3.13	□□□□□ -1.91
RAD4	YER162C	STE14	P32584	239 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YEF1	P32622	495 aa		3.13	□□□□□ -1.91
RAD4	YER162C	MRPL6	P32904	214 aa		3.13	□□□□□ -1.91
RAD4	YER162C	SOF1	P33750	489 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	JEN1	P36035	616 aa		3.13	□□□□□ -1.91
RAD4	YER162C	CTF8	P38877	133 aa		3.13	□□□□□ -1.91
RAD4	YER162C	RBG1	P39729	369 aa		3.13	□□□□□ -1.91
RAD4	YER162C	ISC1	P40015	477 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	YIL169C	P40442	995 aa		3.13	□□□□□ -1.91
RAD4	YER162C	AVT7	P40501	490 aa		3.13	□□□□□ -1.91
RAD4	YER162C	MRPL49	P40858	161 aa	Predicted RBP	3.13	□□□□□ -1.91
RAD4	YER162C	MIC19	P43594	170 aa		3.13	□□□□□ -1.91
RAD4	YER162C	PRY1	P47032	299 aa		3.13	□□□□□ -1.91
RAD4	YER162C	UFD1	P53044	361 aa		3.13	□□□□□ -1.91
RAD4	YER162C	MRPL22	P53881	309 aa		3.13	□□□□□ -1.91
RAD4	YER162C	DID2	P69771	204 aa		3.13	□□□□□ -1.91
RAD4	YER162C	HPT1	Q04178	221 aa	Known RBP	3.13	□□□□□ -1.91
RAD4	YER162C	YMR027W	Q04371	470 aa		3.13	□□□□□ -1.91
RAD4	YER162C	NAT4	Q04751	285 aa		3.13	□□□□□ -1.91
RAD4	YER162C	APC9	Q12107	265 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YIR021W-A	Q3E739	70 aa		3.13	□□□□□ -1.91
RAD4	YER162C	YKL033W-A	Q86ZR7	236 aa		3.13	□□□□□ -1.91
RAD4	YER162C	TPK3	P05986	398 aa		3.12	□□□□□ -1.91
RAD4	YER162C	HEM4	P06174	275 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YHR214C-D	P0CX93	97 aa		3.12	□□□□□ -1.91
RAD4	YER162C	HEM15	P16622	393 aa		3.12	□□□□□ -1.91
RAD4	YER162C	BUB2	P26448	306 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	SPS18	P32572	300 aa		3.12	□□□□□ -1.91
RAD4	YER162C	CAT2	P32796	670 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	PHO90	P39535	881 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YJR011C	P47086	261 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	GPI14	P47088	403 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	MIC26	P50087	233 aa		3.12	□□□□□ -1.91
RAD4	YER162C	JAC1	P53193	184 aa		3.12	□□□□□ -1.91
RAD4	YER162C	CPD1	P53314	239 aa		3.12	□□□□□ -1.91
RAD4	YER162C	MPA43	P53583	542 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	SAE3	P89114	91 aa		3.12	□□□□□ -1.91
RAD4	YER162C	MAK3	Q03503	176 aa		3.12	□□□□□ -1.91
RAD4	YER162C	CSN9	Q03981	162 aa		3.12	□□□□□ -1.91
RAD4	YER162C	CAC2	Q04199	468 aa		3.12	□□□□□ -1.91
RAD4	YER162C	MIX14	Q04341	121 aa		3.12	□□□□□ -1.91
RAD4	YER162C	YMR253C	Q04835	414 aa		3.12	□□□□□ -1.91
RAD4	YER162C	CTR3	Q06686	241 aa		3.12	□□□□□ -1.91
RAD4	YER162C	RRG7	Q08774	242 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	RDI1	Q12434	202 aa		3.12	□□□□□ -1.91
RAD4	YER162C	RPL12A	P0CX53	165 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	RPL12B	P0CX54	165 aa		3.12	□□□□□ -1.91
RAD4	YER162C	PET9	P18239	318 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	YCR090C	P25654	182 aa	Known RBP	3.12	□□□□□ -1.91
RAD4	YER162C	MSS1	P32559	526 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD4	YER162C	RCK1	P38622	512 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms