RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YIP5P53108 310 aa6.74□□□□□ -1.33
PUP3YER094C GTF1P53260 183 aaPredicted RBP6.74□□□□□ -1.33
PUP3YER094C YOR186WQ08560 144 aa6.74□□□□□ -1.33
PUP3YER094C RRS1Q08746 203 aaKnown RBP6.74□□□□□ -1.33
PUP3YER094C TRM13Q12383 476 aa6.74□□□□□ -1.33
PUP3YER094C URA3P03962 267 aa6.73□□□□□ -1.33
PUP3YER094C PET122P10355 254 aa6.73□□□□□ -1.33
PUP3YER094C HNM1P19807 563 aa6.73□□□□□ -1.33
PUP3YER094C DIT1P21623 536 aa6.73□□□□□ -1.33
PUP3YER094C RFA1P22336 621 aaKnown RBP6.73□□□□□ -1.33
PUP3YER094C RPI1P23250 407 aaKnown RBP6.73□□□□□ -1.33
PUP3YER094C MRPL27P36526 146 aaPredicted RBP6.73□□□□□ -1.33
PUP3YER094C YBR220CP38318 560 aa6.73□□□□□ -1.33
PUP3YER094C YER079WP40052 210 aaKnown RBP6.73□□□□□ -1.33
PUP3YER094C TOK1P40310 691 aa6.73□□□□□ -1.33
PUP3YER094C SSN8P47821 323 aa6.73□□□□□ -1.33
PUP3YER094C YDC1Q02896 317 aa6.73□□□□□ -1.33
PUP3YER094C YML018CQ03730 393 aa6.73□□□□□ -1.33
PUP3YER094C YOR385WQ08909 290 aa6.73□□□□□ -1.33
PUP3YER094C EAF3Q12432 401 aa6.73□□□□□ -1.33
PUP3YER094C PET20Q99373 253 aa6.73□□□□□ -1.33
PUP3YER094C RPL25P04456 142 aaKnown RBP6.72□□□□□ -1.33
PUP3YER094C RPS31P05759 152 aaKnown RBP6.72□□□□□ -1.33
PUP3YER094C YLL053CP0CD98 152 aa6.72□□□□□ -1.33
PUP3YER094C MRP17P28778 131 aa6.72□□□□□ -1.33
PUP3YER094C FMT1P32785 401 aa6.72□□□□□ -1.33
PUP3YER094C UTP30P36144 274 aaKnown RBP6.72□□□□□ -1.33
PUP3YER094C FIG1P38224 298 aa6.72□□□□□ -1.33
PUP3YER094C TYW3P53177 273 aa6.72□□□□□ -1.33
PUP3YER094C ALG9P53868 555 aaKnown RBP6.72□□□□□ -1.33
PUP3YER094C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PUP3YER094C YDR248CQ03786 193 aa6.72□□□□□ -1.33
PUP3YER094C DLT1Q04216 342 aa6.72□□□□□ -1.33
PUP3YER094C API2Q04413 109 aa6.72□□□□□ -1.33
PUP3YER094C PIN3Q06449 215 aa6.72□□□□□ -1.33
PUP3YER094C AAC1P04710 309 aa6.71□□□□□ -1.34
PUP3YER094C RPS23AP0CX29 145 aaKnown RBP6.71□□□□□ -1.34
PUP3YER094C RPS23BP0CX30 145 aa6.71□□□□□ -1.34
PUP3YER094C PEX4P29340 183 aa6.71□□□□□ -1.34
PUP3YER094C FAT1P38225 669 aa6.71□□□□□ -1.34
PUP3YER094C YHL037CP38733 133 aa6.71□□□□□ -1.34
PUP3YER094C EGT2P42835 1041 aa6.71□□□□□ -1.34
PUP3YER094C YJR011CP47086 261 aaPredicted RBP6.71□□□□□ -1.34
PUP3YER094C OKP1P53298 406 aa6.71□□□□□ -1.34
PUP3YER094C CRZ1P53968 678 aa6.71□□□□□ -1.34
PUP3YER094C IFM1P25038 676 aa6.7□□□□□ -1.34
PUP3YER094C POP8P38208 133 aa6.7□□□□□ -1.34
PUP3YER094C PRS3P38689 320 aaKnown RBP6.7□□□□□ -1.34
PUP3YER094C COS8P38723 381 aa6.7□□□□□ -1.34
PUP3YER094C YMR144WP40214 342 aaKnown RBP6.7□□□□□ -1.34
PUP3YER094C MRL1Q06815 381 aa6.7□□□□□ -1.34
PUP3YER094C MED4Q12343 284 aa6.7□□□□□ -1.34
PUP3YER094C PRM4Q12498 284 aa6.7□□□□□ -1.34
PUP3YER094C UBA3Q99344 299 aa6.7□□□□□ -1.34
PUP3YER094C ARG80P07249 177 aa6.69□□□□□ -1.34
PUP3YER094C CPR4P25334 318 aa6.69□□□□□ -1.34
PUP3YER094C YCR101CP25607 182 aa6.69□□□□□ -1.34
PUP3YER094C AGA2P32781 87 aa6.69□□□□□ -1.34
PUP3YER094C FLO10P36170 1169 aa6.69□□□□□ -1.34
PUP3YER094C PRS2P38620 318 aaKnown RBP6.69□□□□□ -1.34
PUP3YER094C RRF1P38771 230 aa6.69□□□□□ -1.34
PUP3YER094C VMA22P38784 181 aa6.69□□□□□ -1.34
PUP3YER094C YER137CP40083 148 aaKnown RBP6.69□□□□□ -1.34
PUP3YER094C MRX5P47007 382 aa6.69□□□□□ -1.34
PUP3YER094C GWT1P47026 490 aa6.69□□□□□ -1.34
PUP3YER094C MRPL50P53724 139 aa6.69□□□□□ -1.34
PUP3YER094C CAB5Q03941 241 aa6.69□□□□□ -1.34
PUP3YER094C SYM1Q06563 197 aa6.69□□□□□ -1.34
PUP3YER094C SCP1Q08873 200 aa6.69□□□□□ -1.34
PUP3YER094C FCY22Q12119 530 aa6.69□□□□□ -1.34
PUP3YER094C WTM2Q12206 467 aa6.69□□□□□ -1.34
PUP3YER094C TFB5Q3E7C1 72 aaPredicted RBP6.69□□□□□ -1.34
PUP3YER094C IMP1P28627 190 aa6.68□□□□□ -1.34
PUP3YER094C OCH1P31755 480 aa6.68□□□□□ -1.34
PUP3YER094C SUA5P32579 426 aa6.68□□□□□ -1.34
PUP3YER094C YGP1P38616 354 aaKnown RBP6.68□□□□□ -1.34
PUP3YER094C BFR1P38934 470 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
PUP3YER094C YGR210CP42942 411 aa6.68□□□□□ -1.34
PUP3YER094C HNT2P49775 206 aa6.68□□□□□ -1.34
PUP3YER094C TAF4P50105 388 aa6.68□□□□□ -1.34
PUP3YER094C SKO1Q02100 647 aa6.68□□□□□ -1.34
PUP3YER094C YPL067CQ02754 198 aa6.68□□□□□ -1.34
PUP3YER094C PRM15Q03262 622 aa6.68□□□□□ -1.34
PUP3YER094C YMR279CQ03263 540 aa6.68□□□□□ -1.34
PUP3YER094C YMR254CQ04838 102 aa6.68□□□□□ -1.34
PUP3YER094C GRC3Q07845 632 aa6.68□□□□□ -1.34
PUP3YER094C MPD1Q12404 318 aaKnown RBP6.68□□□□□ -1.34
PUP3YER094C ATG40Q99325 256 aa6.68□□□□□ -1.34
PUP3YER094C SSA3P09435 649 aaKnown RBP6.67□□□□□ -1.34
PUP3YER094C YCR016WP25617 290 aaKnown RBP6.67□□□□□ -1.34
PUP3YER094C ACB1P31787 87 aa6.67□□□□□ -1.34
PUP3YER094C YKL107WP34251 309 aa6.67□□□□□ -1.34
PUP3YER094C EDS1P38073 919 aa6.67□□□□□ -1.34
PUP3YER094C YBR197CP38306 217 aa6.67□□□□□ -1.34
PUP3YER094C YNL092WP53934 400 aa6.67□□□□□ -1.34
PUP3YER094C PLP1Q04004 230 aa6.67□□□□□ -1.34
PUP3YER094C YDR286CQ05530 114 aa6.67□□□□□ -1.34
PUP3YER094C GAT3Q07928 141 aa6.67□□□□□ -1.34
PUP3YER094C FEX2Q08991 375 aa6.67□□□□□ -1.34
PUP3YER094C YML003WP0CF16 290 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms