RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B YLR173WQ06247 608 aa0.32□□□□□ -2.36
SBH1YER087C-B ARR2Q06597 130 aa0.32□□□□□ -2.36
SBH1YER087C-B YPR172WQ06608 200 aa0.32□□□□□ -2.36
SBH1YER087C-B RDS3Q06835 107 aaPredicted RBP0.32□□□□□ -2.36
SBH1YER087C-B YOL019WQ08157 551 aa0.32□□□□□ -2.36
SBH1YER087C-B SLD7Q08457 257 aa0.32□□□□□ -2.36
SBH1YER087C-B RRS1Q08746 203 aaKnown RBP0.32□□□□□ -2.36
SBH1YER087C-B YPL257WQ08974 193 aa0.32□□□□□ -2.36
SBH1YER087C-B BTS1Q12051 335 aa0.32□□□□□ -2.36
SBH1YER087C-B MSH5Q12175 901 aa0.32□□□□□ -2.36
SBH1YER087C-B USB1Q12208 290 aaKnown RBP0.32□□□□□ -2.36
SBH1YER087C-B MED4Q12343 284 aa0.32□□□□□ -2.36
SBH1YER087C-B SNU23Q12368 194 aaPredicted RBP0.32□□□□□ -2.36
SBH1YER087C-B ATG31Q12421 196 aa0.32□□□□□ -2.36
SBH1YER087C-B LSO2Q3E772 92 aaKnown RBP0.32□□□□□ -2.36
SBH1YER087C-B YBL008W-AQ3E821 79 aa0.32□□□□□ -2.36
SBH1YER087C-B HTL1Q9URQ5 78 aa0.32□□□□□ -2.36
SBH1YER087C-B STH1P32597 1359 aa0.32□□□□□ -2.36
SBH1YER087C-B NUP157P40064 1391 aaKnown RBP0.32□□□□□ -2.36
SBH1YER087C-B REP2P03872 296 aa0.31□□□□□ -2.36
SBH1YER087C-B BCY1P07278 416 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B DDI2P0CH63 225 aa0.31□□□□□ -2.36
SBH1YER087C-B DDI3P0CH64 225 aa0.31□□□□□ -2.36
SBH1YER087C-B FBA1P14540 359 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B GRX2P17695 143 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B SCL1P21243 252 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B MDH2P22133 377 aa0.31□□□□□ -2.36
SBH1YER087C-B MRPL25P23369 157 aa0.31□□□□□ -2.36
SBH1YER087C-B RPL24BP24000 155 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B RPS5P26783 225 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B MEI4P29467 408 aa0.31□□□□□ -2.36
SBH1YER087C-B ERG24P32462 438 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B SSO1P32867 290 aa0.31□□□□□ -2.36
SBH1YER087C-B YUH1P35127 236 aa0.31□□□□□ -2.36
SBH1YER087C-B YPT52P36018 234 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B YBR063CP38083 404 aa0.31□□□□□ -2.36
SBH1YER087C-B HEK2P38199 381 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
SBH1YER087C-B ECM33P38248 429 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B ERV15P38312 142 aa0.31□□□□□ -2.36
SBH1YER087C-B CUE1P38428 203 aa0.31□□□□□ -2.36
SBH1YER087C-B YHR125WP38831 101 aa0.31□□□□□ -2.36
SBH1YER087C-B YHR127WP38833 243 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B BFR1P38934 470 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
SBH1YER087C-B AVT2P39981 480 aa0.31□□□□□ -2.36
SBH1YER087C-B YER085CP40058 173 aa0.31□□□□□ -2.36
SBH1YER087C-B ICE2P40499 491 aa0.31□□□□□ -2.36
SBH1YER087C-B FIS1P40515 155 aa0.31□□□□□ -2.36
SBH1YER087C-B TIR3P40552 269 aa0.31□□□□□ -2.36
SBH1YER087C-B FAR7P43592 221 aa0.31□□□□□ -2.36
SBH1YER087C-B RPA43P46669 326 aa0.31□□□□□ -2.36
SBH1YER087C-B IRC18P47056 224 aa0.31□□□□□ -2.36
SBH1YER087C-B JHD2P47156 728 aaPredicted RBP0.31□□□□□ -2.36
SBH1YER087C-B BAT2P47176 376 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B YJR149WP47177 404 aa0.31□□□□□ -2.36
SBH1YER087C-B MIC26P50087 233 aa0.31□□□□□ -2.36
SBH1YER087C-B ERG25P53045 309 aa0.31□□□□□ -2.36
SBH1YER087C-B YGL159WP53110 370 aa0.31□□□□□ -2.36
SBH1YER087C-B USE1P53146 245 aa0.31□□□□□ -2.36
SBH1YER087C-B TOS8P53147 276 aa0.31□□□□□ -2.36
SBH1YER087C-B YGR219WP53307 113 aa0.31□□□□□ -2.36
SBH1YER087C-B MPP6P53725 186 aaPredicted RBP0.31□□□□□ -2.36
SBH1YER087C-B FYV6P53913 173 aa0.31□□□□□ -2.36
SBH1YER087C-B YDR209CQ03480 137 aa0.31□□□□□ -2.36
SBH1YER087C-B YPR147CQ06522 304 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B HEM25Q07534 307 aa0.31□□□□□ -2.36
SBH1YER087C-B PAM18Q07914 168 aa0.31□□□□□ -2.36
SBH1YER087C-B MEU1Q07938 337 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
SBH1YER087C-B YLR030WQ07967 263 aa0.31□□□□□ -2.36
SBH1YER087C-B RRT8Q08219 342 aa0.31□□□□□ -2.36
SBH1YER087C-B NIP7Q08962 181 aaKnown RBP0.31□□□□□ -2.36
SBH1YER087C-B AKR2Q12013 749 aa0.31□□□□□ -2.36
SBH1YER087C-B YOR029WQ12243 111 aa0.31□□□□□ -2.36
SBH1YER087C-B YPR011CQ12251 326 aa0.31□□□□□ -2.36
SBH1YER087C-B DCN1Q12395 269 aa0.31□□□□□ -2.36
SBH1YER087C-B PSF1Q12488 208 aa0.31□□□□□ -2.36
SBH1YER087C-B MHT1Q12525 324 aa0.31□□□□□ -2.36
SBH1YER087C-B YOR020W-AQ3E824 90 aa0.31□□□□□ -2.36
SBH1YER087C-B NCB2Q92317 146 aa0.31□□□□□ -2.36
SBH1YER087C-B YPL229WQ99395 206 aa0.31□□□□□ -2.36
SBH1YER087C-B SSK22P25390 1331 aaPredicted RBP0.31□□□□□ -2.36
SBH1YER087C-B BEM2P39960 2167 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B PAN1P32521 1480 aa0.3□□□□□ -2.36
SBH1YER087C-B YHR139C-AO13536 103 aa0.3□□□□□ -2.36
SBH1YER087C-B JIP3O13555 125 aa0.3□□□□□ -2.36
SBH1YER087C-B CDC8P00572 216 aa0.3□□□□□ -2.36
SBH1YER087C-B IPP1P00817 287 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B RAS2P01120 322 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B MSW1P04803 379 aa0.3□□□□□ -2.36
SBH1YER087C-B FCY2P17064 533 aa0.3□□□□□ -2.36
SBH1YER087C-B PET9P18239 318 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B SEC22P22214 214 aa0.3□□□□□ -2.36
SBH1YER087C-B YGL010WP25338 174 aa0.3□□□□□ -2.36
SBH1YER087C-B PEX4P29340 183 aa0.3□□□□□ -2.36
SBH1YER087C-B OAC1P32332 324 aa0.3□□□□□ -2.36
SBH1YER087C-B VMA11P32842 164 aa0.3□□□□□ -2.36
SBH1YER087C-B NTF2P33331 125 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B SGE1P33335 543 aa0.3□□□□□ -2.36
SBH1YER087C-B UPS2P35200 230 aa0.3□□□□□ -2.36
SBH1YER087C-B SRY1P36007 326 aa0.3□□□□□ -2.36
SBH1YER087C-B SHE2P36068 246 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms