RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C GTR2P53290 341 aa1.03□□□□□ -2.24
SWI5YDR146C MSA1Q08471 629 aa1.03□□□□□ -2.24
SWI5YDR146C AKR2Q12013 749 aa1.03□□□□□ -2.24
SWI5YDR146C YHR139C-AO13536 103 aa1.03□□□□□ -2.25
SWI5YDR146C YHR032W-AP0C5N6 59 aa1.03□□□□□ -2.25
SWI5YDR146C GRX2P17695 143 aaKnown RBP1.03□□□□□ -2.25
SWI5YDR146C ERG24P32462 438 aaKnown RBP1.03□□□□□ -2.25
SWI5YDR146C DOA4P32571 926 aa1.03□□□□□ -2.25
SWI5YDR146C SGE1P33335 543 aa1.03□□□□□ -2.25
SWI5YDR146C KRE28Q04431 385 aa1.03□□□□□ -2.25
SWI5YDR146C INM2Q05533 292 aa1.03□□□□□ -2.25
SWI5YDR146C PAM18Q07914 168 aa1.03□□□□□ -2.25
SWI5YDR146C YHR086W-AQ3E746 53 aa1.03□□□□□ -2.25
SWI5YDR146C RAS2P01120 322 aaKnown RBP1.02□□□□□ -2.25
SWI5YDR146C PUT1P09368 476 aa1.02□□□□□ -2.25
SWI5YDR146C SNA3P14359 133 aa1.02□□□□□ -2.25
SWI5YDR146C YPT52P36018 234 aaKnown RBP1.02□□□□□ -2.25
SWI5YDR146C YHR127WP38833 243 aaKnown RBP1.02□□□□□ -2.25
SWI5YDR146C YJR056CP47115 236 aa1.02□□□□□ -2.25
SWI5YDR146C YMR279CQ03263 540 aa1.02□□□□□ -2.25
SWI5YDR146C YLR283WQ05867 314 aa1.02□□□□□ -2.25
SWI5YDR146C MRPL39P36533 70 aa1.01□□□□□ -2.25
SWI5YDR146C TOS8P53147 276 aa1.01□□□□□ -2.25
SWI5YDR146C RHO3Q00245 231 aaKnown RBP1.01□□□□□ -2.25
SWI5YDR146C RRN5Q02983 363 aa1.01□□□□□ -2.25
SWI5YDR146C RRS1Q08746 203 aaKnown RBP1.01□□□□□ -2.25
SWI5YDR146C MED4Q12343 284 aa1.01□□□□□ -2.25
SWI5YDR146C SNU23Q12368 194 aaPredicted RBP1.01□□□□□ -2.25
SWI5YDR146C DSF1P0CX08 502 aa1.01□□□□□ -2.25
SWI5YDR146C YNR073CP0CX09 502 aa1.01□□□□□ -2.25
SWI5YDR146C SCL1P21243 252 aaKnown RBP1.01□□□□□ -2.25
SWI5YDR146C RPF1P38805 295 aaKnown RBP1.01□□□□□ -2.25
SWI5YDR146C FMC1P40491 155 aa1.01□□□□□ -2.25
SWI5YDR146C RMR1P53060 241 aa1.01□□□□□ -2.25
SWI5YDR146C YGR026WP53217 278 aa1.01□□□□□ -2.25
SWI5YDR146C ARR2Q06597 130 aa1.01□□□□□ -2.25
SWI5YDR146C NIP7Q08962 181 aaKnown RBP1.01□□□□□ -2.25
SWI5YDR146C ADH3P07246 375 aaKnown RBP1□□□□□ -2.25
SWI5YDR146C NTF2P33331 125 aaKnown RBP1□□□□□ -2.25
SWI5YDR146C LDB7P38210 180 aa1□□□□□ -2.25
SWI5YDR146C ECM33P38248 429 aaKnown RBP1□□□□□ -2.25
SWI5YDR146C RPC17P47076 161 aa1□□□□□ -2.25
SWI5YDR146C BAT2P47176 376 aaKnown RBP1□□□□□ -2.25
SWI5YDR146C NUP84P52891 726 aa1□□□□□ -2.25
SWI5YDR146C PET117Q02771 107 aa1□□□□□ -2.25
SWI5YDR146C YLR126CQ12288 251 aa1□□□□□ -2.25
SWI5YDR146C MHT1Q12525 324 aa1□□□□□ -2.25
SWI5YDR146C PEX4P29340 183 aa1□□□□□ -2.25
SWI5YDR146C PEX17P40155 199 aa1□□□□□ -2.25
SWI5YDR146C AYR1P40471 297 aa1□□□□□ -2.25
SWI5YDR146C HAM1P47119 197 aaKnown RBP1□□□□□ -2.25
SWI5YDR146C MCM22P47167 239 aa1□□□□□ -2.25
SWI5YDR146C MRPS8Q03799 155 aa1□□□□□ -2.25
SWI5YDR146C MDH3P32419 343 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25not detected
SWI5YDR146C YHR180WP38868 163 aa0.99□□□□□ -2.25
SWI5YDR146C RSM25P40496 264 aa0.99□□□□□ -2.25
SWI5YDR146C FIS1P40515 155 aa0.99□□□□□ -2.25
SWI5YDR146C CAT5P41735 233 aa0.99□□□□□ -2.25
SWI5YDR146C PRM10P42946 383 aa0.99□□□□□ -2.25
SWI5YDR146C MRPL50P53724 139 aa0.99□□□□□ -2.25
SWI5YDR146C DID2P69771 204 aa0.99□□□□□ -2.25
SWI5YDR146C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25not detected
SWI5YDR146C YPL257WQ08974 193 aa0.99□□□□□ -2.25
SWI5YDR146C HTL1Q9URQ5 78 aa0.99□□□□□ -2.25
SWI5YDR146C IPP1P00817 287 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C SPT3P06844 337 aa0.98□□□□□ -2.25
SWI5YDR146C BCY1P07278 416 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C MATALPHA1P0CY06 175 aa0.98□□□□□ -2.25
SWI5YDR146C HMLALPHA1P0CY07 175 aa0.98□□□□□ -2.25
SWI5YDR146C NEJ1Q06148 342 aa0.98□□□□□ -2.25
SWI5YDR146C RPL9AP05738 191 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C FBA1P14540 359 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C MRPL25P23369 157 aa0.98□□□□□ -2.25
SWI5YDR146C VPS21P36017 210 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C YMR144WP40214 342 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C TRM9P49957 279 aa0.98□□□□□ -2.25
SWI5YDR146C RPL9BP51401 191 aaKnown RBP0.98□□□□□ -2.25
SWI5YDR146C NOP13P53883 403 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
SWI5YDR146C PRM15Q03262 622 aa0.98□□□□□ -2.25
SWI5YDR146C ATG39Q06159 398 aa0.98□□□□□ -2.25
SWI5YDR146C HEM25Q07534 307 aa0.98□□□□□ -2.25
SWI5YDR146C BOL1Q3E793 110 aa0.98□□□□□ -2.25
SWI5YDR146C YOR020W-AQ3E824 90 aa0.98□□□□□ -2.25
SWI5YDR146C CFT1Q06632 1357 aaKnown RBP0.97□□□□□ -2.25
SWI5YDR146C CDC7P06243 507 aa0.97□□□□□ -2.25
SWI5YDR146C DDI2P0CH63 225 aa0.97□□□□□ -2.25
SWI5YDR146C DDI3P0CH64 225 aa0.97□□□□□ -2.25
SWI5YDR146C OAC1P32332 324 aa0.97□□□□□ -2.25
SWI5YDR146C SRY1P36007 326 aa0.97□□□□□ -2.25
SWI5YDR146C PHO88P38264 188 aaPredicted RBP0.97□□□□□ -2.25
SWI5YDR146C URA8P38627 578 aaPredicted RBP0.97□□□□□ -2.25
SWI5YDR146C IRC22P40006 225 aa0.97□□□□□ -2.25
SWI5YDR146C YER085CP40058 173 aa0.97□□□□□ -2.25
SWI5YDR146C ERV29P53337 310 aa0.97□□□□□ -2.25
SWI5YDR146C TRM12Q04235 462 aa0.97□□□□□ -2.25
SWI5YDR146C USB1Q12208 290 aaKnown RBP0.97□□□□□ -2.25
SWI5YDR146C TPO4Q12256 659 aa0.97□□□□□ -2.25
SWI5YDR146C MSW1P04803 379 aa0.97□□□□□ -2.25
SWI5YDR146C YCR016WP25617 290 aaKnown RBP0.97□□□□□ -2.25
SWI5YDR146C MEI4P29467 408 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms