RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOB1	YDR110W	GPI17	Q04080	534 aa		4.86	□□□□□ -1.63
FOB1	YDR110W	YLR030W	Q07967	263 aa		4.86	□□□□□ -1.63
FOB1	YDR110W	RRS1	Q08746	203 aa	Known RBP	4.86	□□□□□ -1.63
FOB1	YDR110W	GEP5	Q12393	293 aa		4.86	□□□□□ -1.63
FOB1	YDR110W	YGL041W-A	P0C5N3	154 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	CDC50	P25656	391 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	CPR3	P25719	182 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	APE2	P32454	952 aa	Known RBP	4.85	□□□□□ -1.63
FOB1	YDR110W	AIM26	P32858	118 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	CBP4	P37267	147 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	MDM31	P38880	579 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	VMA7	P39111	118 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	YIA6	P40556	373 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	HAC1	P41546	238 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	KEG1	P43614	200 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	RPA43	P46669	326 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	FRE4	P53746	719 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	DUG3	P53871	357 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	YNL184C	P53876	108 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	YPL113C	Q02961	396 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	PAL1	Q05518	499 aa	Known RBP	4.85	□□□□□ -1.63
FOB1	YDR110W	ATG39	Q06159	398 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	YOL073C	Q08232	322 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	IRC13	Q08630	104 aa		4.85	□□□□□ -1.63
FOB1	YDR110W	IPP1	P00817	287 aa	Known RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	NUP1	P20676	1076 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	YCR090C	P25654	182 aa	Known RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	MRP49	P32388	137 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	SPT4	P32914	102 aa	Predicted RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	SIM1	P40472	476 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	SER2	P42941	309 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	YAE1	P47118	141 aa	Predicted RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	UBC12	P52491	188 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	COG7	P53195	279 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	YVH1	Q02256	364 aa	Known RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	RAV2	Q03956	351 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	FSF1	Q12029	327 aa	Known RBP	4.84	□□□□□ -1.63
FOB1	YDR110W	SUT2	Q12286	268 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	HRT3	Q12347	344 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	YPL119C-A	Q3E751	87 aa		4.84	□□□□□ -1.63
FOB1	YDR110W	SUC2	P00724	532 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	PHO2	P07269	559 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	CAP2	P13517	287 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	RPS2	P25443	254 aa	Known RBP	4.83	□□□□□ -1.64
FOB1	YDR110W	CTP1	P38152	299 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	TRS20	P38334	175 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	LEU5	P38702	357 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	COS8	P38723	381 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	TRR2	P38816	342 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	AIM23	P47015	356 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YIP4	P53093	235 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	TRM44	Q02648	567 aa	Known RBP	4.83	□□□□□ -1.64
FOB1	YDR110W	PET191	Q02772	108 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YMR317W	Q04893	1140 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YPR098C	Q06089	161 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	IRC10	Q08118	586 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	COX5A	P00424	153 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	ADK1	P07170	222 aa	Known RBP	4.83	□□□□□ -1.64
FOB1	YDR110W	MDM10	P18409	493 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YHL044W	P38727	235 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	PEX22	P39718	180 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	MEP2	P41948	499 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	WWM1	P43582	211 aa	Known RBP	4.83	□□□□□ -1.64
FOB1	YDR110W	CPR7	P47103	393 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YPS5	P53057	165 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	ARO8	P53090	500 aa	Known RBP	4.83	□□□□□ -1.64
FOB1	YDR110W	YNR048W	P53740	393 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	SWS2	P53937	143 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	APS2	Q00381	147 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	SUE1	Q06524	206 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	COQ10	Q08058	207 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	MDM32	Q12171	622 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	MHT1	Q12525	324 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YLR099W-A	Q3E798	87 aa		4.83	□□□□□ -1.64
FOB1	YDR110W	YKR104W	P0CE69	306 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	GCN3	P14741	305 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	MIR1	P23641	311 aa	Known RBP	4.82	□□□□□ -1.64
FOB1	YDR110W	ILV6	P25605	309 aa	Known RBP	4.82	□□□□□ -1.64
FOB1	YDR110W	RPL16B	P26785	198 aa	Known RBP	4.82	□□□□□ -1.64
FOB1	YDR110W	COX13	P32799	129 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	PTC1	P35182	281 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	MCR1	P36060	302 aa	Known RBP	4.82	□□□□□ -1.64
FOB1	YDR110W	ARC40	P38328	384 aa	Known RBP	4.82	□□□□□ -1.64
FOB1	YDR110W	DOG2	P38773	246 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	DOG1	P38774	246 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	ARG2	P40360	574 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	CFD1	P40558	293 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	MOB2	P43563	287 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	MCM22	P47167	239 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	HMS2	P47175	358 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	UBC13	P52490	153 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	PCP1	P53259	346 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	HST4	P53688	370 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	MRX11	Q03079	207 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	OSW1	Q08692	278 aa		4.82	□□□□□ -1.64
FOB1	YDR110W	HAP2	P06774	265 aa		4.81	□□□□□ -1.64
FOB1	YDR110W	RPL2A	P0CX45	254 aa	Known RBP	4.81	□□□□□ -1.64
FOB1	YDR110W	RPL2B	P0CX46	254 aa	Known RBP	4.81	□□□□□ -1.64
FOB1	YDR110W	BAR1	P12630	587 aa		4.81	□□□□□ -1.64
FOB1	YDR110W	SPO12	P17123	173 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms