RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF22	RUF22	THO1	P40040	218 aa	Known RBP	0.89	□□□□□ -2.27
RUF22	RUF22	PRM10	P42946	383 aa		0.89	□□□□□ -2.27
RUF22	RUF22	SMD3	P43321	101 aa	Known RBP	0.89	□□□□□ -2.27
RUF22	RUF22	BNA6	P43619	295 aa		0.89	□□□□□ -2.27
RUF22	RUF22	ILM1	P47155	203 aa		0.89	□□□□□ -2.27
RUF22	RUF22	RMR1	P53060	241 aa		0.89	□□□□□ -2.27
RUF22	RUF22	MRH4	P53166	561 aa		0.89	□□□□□ -2.27
RUF22	RUF22	RHO3	Q00245	231 aa	Known RBP	0.89	□□□□□ -2.27
RUF22	RUF22	FAR8	Q05040	523 aa		0.89	□□□□□ -2.27
RUF22	RUF22	YLR179C	Q06252	201 aa	Known RBP	0.89	□□□□□ -2.27
RUF22	RUF22	PAM18	Q07914	168 aa		0.89	□□□□□ -2.27
RUF22	RUF22	RRT8	Q08219	342 aa		0.89	□□□□□ -2.27
RUF22	RUF22	YCT1	Q12235	531 aa		0.89	□□□□□ -2.27
RUF22	RUF22	COX5A	P00424	153 aa		0.88	□□□□□ -2.27
RUF22	RUF22	SRB4	P32569	687 aa		0.88	□□□□□ -2.27
RUF22	RUF22	VMA11	P32842	164 aa		0.88	□□□□□ -2.27
RUF22	RUF22	YHR127W	P38833	243 aa	Known RBP	0.88	□□□□□ -2.27
RUF22	RUF22	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
RUF22	RUF22	YMR144W	P40214	342 aa	Known RBP	0.88	□□□□□ -2.27
RUF22	RUF22	FMC1	P40491	155 aa		0.88	□□□□□ -2.27
RUF22	RUF22	SNZ3	P43545	298 aa		0.88	□□□□□ -2.27
RUF22	RUF22	HAM1	P47119	197 aa	Known RBP	0.88	□□□□□ -2.27
RUF22	RUF22	YGL034C	P53186	121 aa		0.88	□□□□□ -2.27
RUF22	RUF22	YGR219W	P53307	113 aa		0.88	□□□□□ -2.27
RUF22	RUF22	CYT2	Q00873	224 aa		0.88	□□□□□ -2.27
RUF22	RUF22	RRN5	Q02983	363 aa		0.88	□□□□□ -2.27
RUF22	RUF22	MZM1	Q03429	123 aa	Predicted RBP	0.88	□□□□□ -2.27
RUF22	RUF22	YML108W	Q03759	105 aa		0.88	□□□□□ -2.27
RUF22	RUF22	COQ10	Q08058	207 aa		0.88	□□□□□ -2.27
RUF22	RUF22	MSH5	Q12175	901 aa		0.88	□□□□□ -2.27
RUF22	RUF22	RPL9A	P05738	191 aa	Known RBP	0.87	□□□□□ -2.27
RUF22	RUF22	MRPL25	P23369	157 aa		0.87	□□□□□ -2.27
RUF22	RUF22	CUE1	P38428	203 aa		0.87	□□□□□ -2.27
RUF22	RUF22	GOS1	P38736	223 aa		0.87	□□□□□ -2.27
RUF22	RUF22	YHR022C	P38763	256 aa		0.87	□□□□□ -2.27
RUF22	RUF22	FIS1	P40515	155 aa		0.87	□□□□□ -2.27
RUF22	RUF22	GLG2	P47011	380 aa		0.87	□□□□□ -2.27
RUF22	RUF22	LIA1	P47120	325 aa	Known RBP	0.87	□□□□□ -2.27
RUF22	RUF22	RPL9B	P51401	191 aa	Known RBP	0.87	□□□□□ -2.27
RUF22	RUF22	SNZ2	P53824	298 aa		0.87	□□□□□ -2.27
RUF22	RUF22	PET117	Q02771	107 aa		0.87	□□□□□ -2.27
RUF22	RUF22	SRL4	Q03085	281 aa		0.87	□□□□□ -2.27
RUF22	RUF22	SSQ1	Q05931	657 aa	Predicted RBP	0.87	□□□□□ -2.27
RUF22	RUF22	YPL257W	Q08974	193 aa		0.87	□□□□□ -2.27
RUF22	RUF22	YOR029W	Q12243	111 aa		0.87	□□□□□ -2.27
RUF22	RUF22	SWI1	P09547	1314 aa		0.87	□□□□□ -2.27
RUF22	RUF22	IPP1	P00817	287 aa	Known RBP	0.86	□□□□□ -2.27
RUF22	RUF22	YGL010W	P25338	174 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YCR016W	P25617	290 aa	Known RBP	0.86	□□□□□ -2.27
RUF22	RUF22	OAC1	P32332	324 aa		0.86	□□□□□ -2.27
RUF22	RUF22	ERG24	P32462	438 aa	Known RBP	0.86	□□□□□ -2.27
RUF22	RUF22	MSA2	P36157	363 aa		0.86	□□□□□ -2.27
RUF22	RUF22	ERV15	P38312	142 aa		0.86	□□□□□ -2.27
RUF22	RUF22	CTR2	P38865	189 aa		0.86	□□□□□ -2.27
RUF22	RUF22	COX15	P40086	486 aa		0.86	□□□□□ -2.27
RUF22	RUF22	RSM25	P40496	264 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YKE4	P40544	346 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YJR079W	P47126	109 aa		0.86	□□□□□ -2.27
RUF22	RUF22	NUP84	P52891	726 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YGL159W	P53110	370 aa		0.86	□□□□□ -2.27
RUF22	RUF22	GTR2	P53290	341 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YNL134C	P53912	376 aa	Known RBP	0.86	□□□□□ -2.27
RUF22	RUF22	BUD25	P85052	153 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YLR283W	Q05867	314 aa		0.86	□□□□□ -2.27
RUF22	RUF22	SEI1	Q06058	285 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YPR172W	Q06608	200 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YOR186W	Q08560	144 aa		0.86	□□□□□ -2.27
RUF22	RUF22	USB1	Q12208	290 aa	Known RBP	0.86	□□□□□ -2.27
RUF22	RUF22	ATG31	Q12421	196 aa		0.86	□□□□□ -2.27
RUF22	RUF22	YOR020W-A	Q3E824	90 aa		0.86	□□□□□ -2.27
RUF22	RUF22	HTL1	Q9URQ5	78 aa		0.86	□□□□□ -2.27
RUF22	RUF22	DDI2	P0CH63	225 aa		0.85	□□□□□ -2.27
RUF22	RUF22	DDI3	P0CH64	225 aa		0.85	□□□□□ -2.27
RUF22	RUF22	MSN4	P33749	630 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YBR219C	P38317	127 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YAR068W	P39564	161 aa		0.85	□□□□□ -2.27
RUF22	RUF22	AVT2	P39981	480 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YJR056C	P47115	236 aa		0.85	□□□□□ -2.27
RUF22	RUF22	HOC1	P47124	396 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YNR062C	P53748	327 aa		0.85	□□□□□ -2.27
RUF22	RUF22	ABF2	Q02486	183 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YML096W	Q04489	525 aa		0.85	□□□□□ -2.27
RUF22	RUF22	NEJ1	Q06148	342 aa		0.85	□□□□□ -2.27
RUF22	RUF22	ATG39	Q06159	398 aa		0.85	□□□□□ -2.27
RUF22	RUF22	YLR030W	Q07967	263 aa		0.85	□□□□□ -2.27
RUF22	RUF22	DRS2	P39524	1355 aa		0.84	□□□□□ -2.27
RUF22	RUF22	MSW1	P04803	379 aa		0.84	□□□□□ -2.27
RUF22	RUF22	TCP1	P12612	559 aa	Known RBP	0.84	□□□□□ -2.27
RUF22	RUF22	SNA3	P14359	133 aa		0.84	□□□□□ -2.27
RUF22	RUF22	EHD3	P28817	500 aa		0.84	□□□□□ -2.27
RUF22	RUF22	SSO1	P32867	290 aa		0.84	□□□□□ -2.27
RUF22	RUF22	RPT5	P33297	434 aa	Known RBP	0.84	□□□□□ -2.27
RUF22	RUF22	YPT52	P36018	234 aa	Known RBP	0.84	□□□□□ -2.27
RUF22	RUF22	YKL075C	P36083	450 aa		0.84	□□□□□ -2.27
RUF22	RUF22	LDB7	P38210	180 aa		0.84	□□□□□ -2.27
RUF22	RUF22	YBR096W	P38256	230 aa		0.84	□□□□□ -2.27
RUF22	RUF22	YBR220C	P38318	560 aa		0.84	□□□□□ -2.27
RUF22	RUF22	PRE6	P40303	254 aa	Known RBP	0.84	□□□□□ -2.27
RUF22	RUF22	YIL001W	P40560	513 aa		0.84	□□□□□ -2.27
RUF22	RUF22	JHD2	P47156	728 aa	Predicted RBP	0.84	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms