RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 KARSQ15046 597 aaKnown RBP12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 PCBP1Q15365 356 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 PRSS36Q5K4E3 855 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 IQCEQ6IPM2 695 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 MIER3Q7Z3K6 550 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 EXOC8Q8IYI6 725 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 ELMOD1Q8N336 334 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 ZNF713Q8N859 430 aaPredicted RBP12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 TTC8Q8TAM2 541 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 ZSCAN18Q8TBC5 510 aaPredicted RBP12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 PSPC1Q8WXF1 523 aaKnown RBP12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 ZSWIM3Q96MP5 696 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 RIT2Q99578 217 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 CSRNP2Q9H175 543 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 CACNG4Q9UBN1 327 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 GREB1Q4ZG55 1949 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 SPAARA0A1B0GVQ0 90 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CASTOR2A6NHX0 329 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 HEPACAM2A8MVW5 462 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 ARNTLO00327 626 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CDX4O14627 284 aaPredicted RBP12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CHADO15335 359 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 PRC1O43663 620 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 KIF4AO95239 1232 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CTHP32929 405 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 SCAPQ12770 1279 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CCINQ13939 588 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 LRCH2Q5VUJ6 765 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 TXNDC11Q6PKC3 985 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 HAUS6Q7Z4H7 955 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CAMKK1Q8N5S9 505 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 RNF149Q8NC42 400 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 GSTCDQ8NEC7 633 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CRYGNQ8WXF5 182 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CPB2Q96IY4 423 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 PAAF1Q9BRP4 392 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 NXF3Q9H4D5 531 aaKnown RBP12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 TRPV4Q9HBA0 871 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 CACNA2D2Q9NY47 1150 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 KLK14Q9P0G3 267 aa12.24□□□□□ -0.45
PTP4A1-207ENST00000639568 MTCL1Q9Y4B5 1905 aaKnown RBP12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 KALRNO60229 2985 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 ARHGEF37A1IGU5 675 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 TSPAN1O60635 241 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 LMAN2Q12907 356 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 MB21D2Q8IYB1 491 aaPredicted RBP12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 CHCHD4Q8N4Q1 142 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 RDM1Q8NG50 284 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 TMEM143Q96AN5 459 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 ZNF512Q96ME7 567 aaPredicted RBP12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 MTA3Q9BTC8 594 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 UNC45AQ9H3U1 944 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 MTRRQ9UBK8 725 aa12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
PTP4A1-207ENST00000639568 INO80B-WBP1J3KQ70 363 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 SH2B2O14492 632 aaPredicted RBP12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 DCLK1O15075 740 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 MSH4O15457 936 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 ASAP2O43150 1006 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 CAPNS1P04632 268 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 MYL4P12829 197 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 MCM5P33992 734 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 CCR2P41597 374 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 ANKS3Q6ZW76 656 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 CYP2U1Q7Z449 544 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 MICU3Q86XE3 530 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 ZNF461Q8TAF7 563 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 BACE2Q9Y5Z0 518 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
PTP4A1-207ENST00000639568 ADAMTS20P59510 1910 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 UNC79Q9P2D8 2635 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 DPYSL4O14531 572 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 STBD1O95210 358 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 CIITAP33076 1130 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 LIFRP42702 1097 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 MAPK8P45983 427 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 IRX4P78413 519 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 FCHO2Q0JRZ9 810 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 PTPAQ15257 358 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 ZNF423Q2M1K9 1284 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 ANO5Q75V66 913 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 C11orf74Q86VG3 221 aa12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
PTP4A1-207ENST00000639568 LEMD2Q8NC56 503 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms