RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 F5H6K3 240 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 GCNT3O95395 438 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 IL1BP01584 269 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 DLATP10515 647 aaKnown RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 KLRC2P26717 231 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 BTDP43251 543 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 PABPC4Q13310 644 aaKnown RBP eCLIP10.54□□□□□ -0.72
HCG18-242ENST00000602319 SPARCL1Q14515 664 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 KHDC1Q4VXA5 237 aaKnown RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 RINT1Q6NUQ1 792 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 ZCCHC9Q8N567 271 aaKnown RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 ZNF564Q8TBZ8 553 aaPredicted RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 TMX4Q9H1E5 349 aaPredicted RBP10.54□□□□□ -0.72
HCG18-242ENST00000602319 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 PDP2Q9P2J9 529 aa10.54□□□□□ -0.72
HCG18-242ENST00000602319 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 MAGEA13PA6NCF6 341 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 THAP12O43422 761 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 ENTPD5O75356 428 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TJP3O95049 919 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 PDHA1P08559 390 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 BCRP11274 1271 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 FGFR1P11362 822 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SIK1P57059 783 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 BFSP1Q12934 665 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 RFWD3Q6PCD5 774 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 CLNKQ7Z7G1 428 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 CCDC25Q86WR0 208 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 ARHGEF19Q8IW93 802 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 C12orf56Q8IXR9 622 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SRRM1Q8IYB3 904 aaKnown RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.53□□□□□ -0.72
HCG18-242ENST00000602319 STX18Q9P2W9 335 aaKnown RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 FETUBQ9UGM5 382 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 ADAMTSL1Q8N6G6 1762 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 MEIS2O14770 477 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 UPP2O95045 317 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SLC34A1Q06495 639 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 C1orf220Q5T0J3 134 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SEPT14Q6ZU15 432 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 CCDC125Q86Z20 511 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 LRRC8CQ8TDW0 803 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 EZH1Q92800 747 aaPredicted RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 EPAS1Q99814 870 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TUBB6Q9BUF5 446 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 DMAP1Q9NPF5 467 aaPredicted RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 DLGAP2Q9P1A6 1054 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SCOCQ9UIL1 159 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 SREBF1P36956 1147 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 FMO1Q01740 532 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 LAMB3Q13751 1172 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 MESDQ14696 234 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 COG2Q14746 738 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 KRT72Q14CN4 511 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TNIP1Q15025 636 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TAF1BQ53T94 588 aaPredicted RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 SGO2Q562F6 1265 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 LRRC74BQ6ZQY2 392 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 OTOAQ7RTW8 1153 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 ZNF720Q7Z2F6 126 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SKA1Q96BD8 255 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 HERPUD2Q9BSE4 406 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 BTBD10Q9BSF8 475 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 TUFT1Q9NNX1 390 aa10.53□□□□□ -0.72
HCG18-242ENST00000602319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
HCG18-242ENST00000602319 ZNF646O15015 1829 aaPredicted RBP10.53□□□□□ -0.72
HCG18-242ENST00000602319 CLDN3O15551 220 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 EXOC3O60645 756 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 TBCAO75347 108 aaKnown RBP10.52□□□□□ -0.73
HCG18-242ENST00000602319 ZWINTO95229 277 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 PSMG1O95456 288 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 CBX6O95503 412 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 DNAJC3Q13217 504 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 MUM1Q2TAK8 710 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 SNX30Q5VWJ9 437 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 HAPLN3Q96S86 360 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 NUP85Q9BW27 656 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 ARID2Q68CP9 1835 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 RASA4BC9J798 803 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 RASA4O43374 803 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 ATP9AO75110 1047 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 CYP3A4P08684 503 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 SKIP12755 728 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 ATF2P15336 505 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 RRM1P23921 792 aa10.52□□□□□ -0.73
HCG18-242ENST00000602319 RAP1GDS1P52306 607 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms