RNA–Protein interactions for RNA: ENST00000577887.1

SNORD53B-201, Transcript of small nucleolar RNA, C/D box 53B, humanhuman

BASIC

Gene SNORD53B, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53B-201ENST00000577887 SLC2A4RGQ9NR83 387 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 SH2B1Q9NRF2 756 aaPredicted RBP1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 FAM217BQ9NTX9 383 aaPredicted RBP1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 KLK14Q9P0G3 267 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 CLEC1BQ9P126 229 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 BCCIPQ9P287 314 aaKnown RBP eCLIP1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 ANKFY1Q9P2R3 1169 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 EPS15L1Q9UBC2 864 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 LRWD1Q9UFC0 647 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 CCDC39Q9UFE4 941 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 DSEQ9UL01 958 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 SMG5Q9UPR3 1016 aaKnown RBP1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 IPPQ9Y573 584 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 ASB3Q9Y575 518 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 PCDHB9Q9Y5E1 797 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 PCDHGC5Q9Y5F6 944 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 NUMBLQ9Y6R0 609 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 TRANK1O15050 2925 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 ZMYM2Q9UBW7 1377 aa1.72□□□□□ -2.13
SNORD53B-201ENST00000577887 SPTBN5Q9NRC6 3674 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 NLRC5Q86WI3 1866 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ATP8B3O60423 1300 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 COL4A4P53420 1690 aaPredicted RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 COL4A6Q14031 1691 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 SPTBN2O15020 2390 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TECTAO75443 2155 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 IGLV3-22A0A075B6J6 115 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CYP3A7-CYP3A51PA0A087WV96 503 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 A0A1B0GUA9 196 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TYW5A2RUC4 315 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 MYMKA6NI61 221 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 OR6C75A6NL08 312 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 K7ENM7 598 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ACKR2O00590 384 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PODXLO00592 558 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 SLC9A3R1O14745 358 aaPredicted RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 HNRNPDLO14979 420 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TEX28O15482 410 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 DHX15O43143 795 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TGM5O43548 720 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ZNF862O60290 1169 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 HUS1O60921 280 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PHACTR2O75167 634 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 NDUFS2O75306 463 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ECI2O75521 394 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RFPL2O75678 378 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RPP40O75818 363 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RECQL4O94761 1208 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 KIF20AO95235 890 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 IL18RAPO95256 599 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TDP2O95551 362 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CCNE2O96020 404 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 LDHAP00338 332 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ABL1P00519 1130 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PDGFBP01127 241 aaPredicted RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TNNC2P02585 160 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CKMP06732 381 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RETP07949 1114 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RHOP08100 348 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 KRT19P08727 400 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CLTAP09496 248 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TMEM191BP0C7N4 346 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 SP9P0CG40 484 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CSH1P0DML2 217 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CSH2P0DML3 217 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 MCF2P10911 925 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ACADMP11310 421 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ATF2P15336 505 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 GNSP15586 552 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ARF4P18085 180 aaPredicted RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PDCP20941 246 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 DRD1P21728 446 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CYP3A7P24462 503 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RPA1P27694 616 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PCSK1P29120 753 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 CDC27P30260 824 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 GDI1P31150 447 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 UBA7P41226 1012 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PNPLA4P41247 253 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RPS9P46781 194 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 IFNAR2P48551 515 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TRAPPC10P48553 1259 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 MCM2P49736 904 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 NEK4P51957 841 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 DGKEP52429 567 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 NPEPPSP55786 919 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PEX3P56589 373 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 SLC8A3P57103 927 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 ANTXR2P58335 489 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 STARD6P59095 220 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 PTENP60484 403 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 RPL10AP62906 217 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TNNC1P63316 161 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 GPC5P78333 572 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 EXOSC10Q01780 885 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 TCF15Q12870 199 aa1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 SFSWAPQ12872 951 aaKnown RBP1.71□□□□□ -2.14
SNORD53B-201ENST00000577887 LMAN2Q12907 356 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms