RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ACOT2P49753 483 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 DUSP6Q16828 381 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 FUT10Q6P4F1 479 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
USP8-212ENST00000560730 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 CPSF3Q9UKF6 684 aaKnown RBP13.18□□□□□ -0.3
USP8-212ENST00000560730 NCOR1O75376 2440 aa13.18□□□□□ -0.3
USP8-212ENST00000560730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
USP8-212ENST00000560730 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 C2CD2LO14523 706 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 NCK2O43639 380 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
USP8-212ENST00000560730 TADA2AO75478 443 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 ZNF202O95125 648 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 SOD2P04179 222 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 BMP1P13497 986 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 CLCNKBP51801 687 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 ALCAMQ13740 583 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 KCNC3Q14003 757 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 CLUL1Q15846 466 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 LLGL2Q6P1M3 1020 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
USP8-212ENST00000560730 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
USP8-212ENST00000560730 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
USP8-212ENST00000560730 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
USP8-212ENST00000560730 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 ADRB2P07550 413 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 GUCY2FP51841 1108 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 ZBTB6Q15916 424 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 UPP1Q16831 310 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 CDCA3Q99618 268 aaPredicted RBP13.16□□□□□ -0.3
USP8-212ENST00000560730 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 RPF1Q9H9Y2 349 aaKnown RBP13.16□□□□□ -0.3
USP8-212ENST00000560730 PLEKHA5Q9HAU0 1116 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 TUBGCP4Q9UGJ1 667 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 BARX2Q9UMQ3 279 aaPredicted RBP13.16□□□□□ -0.3
USP8-212ENST00000560730 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
USP8-212ENST00000560730 SCN1AP35498 2009 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 I3L4J1 428 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 B3GAT3O94766 335 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 GLUD2P49448 558 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 NDUFV1P49821 464 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 WNT7BP56706 349 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 DSG1Q02413 1049 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 SNW1Q13573 536 aaKnown RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 BMS1Q14692 1282 aaKnown RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 POSTNQ15063 836 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 KYAT1Q16773 422 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 AAK1Q2M2I8 961 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 SLC38A7Q9NVC3 462 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
USP8-212ENST00000560730 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
USP8-212ENST00000560730 GOLGA6L4A6NEF3 574 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 PODXLO00592 558 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 EIF3DO15371 548 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP8-212ENST00000560730 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
USP8-212ENST00000560730 URODP06132 367 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 NFICP08651 508 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 GARTP22102 1010 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 BRCC3P46736 316 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 DPYDQ12882 1025 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms