RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 MMP1P03956 469 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 TARSP26639 723 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 MASP1P48740 699 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 MTERF2Q49AM1 385 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 ANO5Q75V66 913 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 TRIM42Q8IWZ5 723 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 C4orf19Q8IY42 314 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 ZSCAN31Q96LW9 406 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 CNTNAP3BQ96NU0 1288 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 CNTNAP3Q9BZ76 1288 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 GCOM2Q9BZD3 368 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 INO80BQ9C086 356 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 NSUN3Q9H649 340 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 CHST12Q9NRB3 414 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 TMEM161AQ9NX61 479 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 ACTR10Q9NZ32 417 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.65
HNRNPC-228ENST00000557033 BTBD18B2RXH4 712 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 GRM6O15303 877 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 JAK2O60674 1132 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 DTNBO60941 627 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 EOMESO95936 686 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 ITPKAP23677 461 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 GRIA4P48058 902 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 KCNQ1P51787 676 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 SAFBQ15424 915 aaKnown RBP eCLIP10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 LEXMQ3ZCV2 418 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 ZNF598Q86UK7 904 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 ZNF410Q86VK4 478 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 FBXO27Q8NI29 283 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 RNF217Q8TC41 542 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 PPP1R16BQ96T49 567 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 UBE2ZQ9H832 354 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 CYP26B1Q9NR63 512 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 SUCLA2Q9P2R7 463 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 PCDHA12Q9UN75 941 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 PCDHB12Q9Y5F1 795 aa10.95□□□□□ -0.66
HNRNPC-228ENST00000557033 A0A0U1RQF3 1178 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 F13A1P00488 732 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 UBE3AQ05086 875 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 DRP2Q13474 957 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 PAN2Q504Q3 1202 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 TCEAL5Q5H9L2 206 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 BNC2Q6ZN30 1099 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 NEK9Q8TD19 979 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SLC7A3Q8WY07 619 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 RSPH1Q8WYR4 309 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 CEP170P1Q96L14 293 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 CRISPLD1Q9H336 500 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 FAN1Q9Y2M0 1017 aa10.94□□□□□ -0.66
HNRNPC-228ENST00000557033 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 A0A087WZ62 844 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 TMEM150BA6NC51 233 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 TBKBP1A7MCY6 615 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 ASAP2O43150 1006 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 SLITRK3O94933 977 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 KIF4AO95239 1232 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 LYPLA2O95372 231 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 XRCC6P12956 609 aaKnown RBP eCLIP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 KCNA5P22460 613 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 SFPQP23246 707 aaKnown RBP eCLIP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 YWHABP31946 246 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 GATMP50440 423 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 HMGN5P82970 282 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 ST3GAL1Q11201 340 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 CCINQ13939 588 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 CAMK1Q14012 370 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 CALCRLQ16602 461 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 SPOUT1Q5T280 376 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 ECHDC2Q86YB7 292 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 RHPN2Q8IUC4 686 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 OR6P1Q8NGX9 317 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 TCP11Q8WWU5 503 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 GATAD2BQ8WXI9 593 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 PPP2R3CQ969Q6 453 aa10.93□□□□□ -0.66
HNRNPC-228ENST00000557033 PLD4Q96BZ4 506 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms