RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CES5AQ6NT32 575 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 FUT10Q6P4F1 479 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DCLRE1AQ6PJP8 1040 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GPR65Q8IYL9 337 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RNF168Q8IYW5 571 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SUSD6Q92537 303 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RXFP1Q9HBX9 757 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CHST7Q9NS84 486 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DZANK1Q9NVP4 752 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TBX20Q9UMR3 447 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ANK1P16157 1881 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TRIOO75962 3097 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CASTOR2A6NHX0 329 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TBCAO75347 108 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 YEATS4O95619 227 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 F13A1P00488 732 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 C1RP00736 705 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KCNE1P15382 129 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 EPCAMP16422 314 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MATR3P43243 847 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CLCN4P51793 760 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GTF2BQ00403 316 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ITIH3Q06033 890 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MCL1Q07820 350 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CAMK2BQ13554 666 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 BECN1Q14457 450 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 NOLC1Q14978 699 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DYMQ7RTS9 669 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CEP120Q8N960 986 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 BICD1Q96G01 975 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 UROC1Q96N76 676 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 APOL5Q9BWW9 433 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PHF7Q9BWX1 381 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ADAM7Q9H2U9 754 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 EPHX3Q9H6B9 360 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SLC38A7Q9NVC3 462 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FNIP2Q9P278 1114 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SF3B1O75533 1304 aaKnown RBP eCLIP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MYMKA6NI61 221 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LOC730098B7Z3J9 87 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 K7ENM7 598 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TEX28O15482 410 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CUTAO60888 179 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ADH1AP07327 375 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ALADP13716 330 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GAP43P17677 238 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 NMT1P30419 496 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 STAT6P42226 847 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MTHFRP42898 656 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LIG4P49917 911 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KYAT1Q16773 422 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SLC10A6Q3KNW5 377 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FAM171A1Q5VUB5 890 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ZNF720Q7Z2F6 126 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 C12orf76Q8N812 135 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DDX12PQ92771 950 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DNAJC19Q96DA6 116 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 NECTIN4Q96NY8 510 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 IPO9Q96P70 1041 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TTPALQ9BTX7 342 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 C1QTNF1Q9BXJ1 281 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PLEKHA5Q9HAU0 1116 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ANKFY1Q9P2R3 1169 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CACNG4Q9UBN1 327 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DPP7Q9UHL4 492 aa10.63□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TMEM189-UBE2V1I3L0A0 370 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TRAPPC3O43617 180 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 B3GAT3O94766 335 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KIF4AO95239 1232 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PIGRP01833 764 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CLTAP09496 248 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RPL9P32969 192 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CLCNKBP51801 687 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CREMQ03060 361 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CBX2Q14781 532 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 UPP1Q16831 310 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SEZ6Q53EL9 994 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GLRA4Q5JXX5 417 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PDXDC1Q6P996 788 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ELMSAN1Q6PJG2 1045 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms