RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 CPA1P15085 419 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CEBPBP17676 345 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 PTPN2P17706 415 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CCR2P41597 374 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CXCL12P48061 93 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CCR3P51677 355 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 SRSF5Q13243 272 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 PTGDRQ13258 359 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CAPSQ13938 189 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 SIM2Q14190 667 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 MXD4Q14582 209 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 EMC2Q15006 297 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 EPHA7Q15375 998 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 PLA2G2CQ5R387 149 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 SLC27A1Q6PCB7 646 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 VITQ6UXI7 678 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 SPEM1Q8N4L4 309 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 TCP11Q8WWU5 503 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 ING5Q8WYH8 240 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 DDX1Q92499 740 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 TCEAL4Q96EI5 215 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 ZSWIM3Q96MP5 696 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 ASB16Q96NS5 453 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 FZD8Q9H461 694 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 VPS54Q9P1Q0 977 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 MRPS23Q9Y3D9 190 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 BACE2Q9Y5Z0 518 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CFAP46Q8IYW2 2715 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 NUP205Q92621 2012 aa8.03□□□□□ -1.12
LRTOMT-217ENST00000539587 CHURC1-FNTBB4DL54 471 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 LYPLA2O95372 231 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 NPTXRO95502 500 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 ZNF806P0C7X5 589 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 GLRA2P23416 452 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 YWHABP31946 246 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 RAP1GAPP47736 663 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 FNTBP49356 437 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 MRPL58Q14197 206 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 FAM187BQ17R55 369 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 LIN9Q5TKA1 542 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 PPP4R3AQ6IN85 833 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 SLC8B1Q6J4K2 584 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 PDXDC1Q6P996 788 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 PPP4R3CPQ6ZMV5 832 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 LONP2Q86WA8 852 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 CDR2LQ86X02 465 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 FAM160A2Q8N612 972 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 DAGLBQ8NCG7 672 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 CCDC148Q8NFR7 591 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 FAM3CQ92520 227 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 FAM20AQ96MK3 541 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 HSD17B14Q9BPX1 270 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 TRMT61BQ9BVS5 477 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 APOL6Q9BWW8 343 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 LSM14BQ9BX40 385 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 C22orf23Q9BZE7 217 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 RGL1Q9NZL6 768 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 NDRG2Q9UN36 371 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 PI4KAP42356 2102 aa8.02□□□□□ -1.13
LRTOMT-217ENST00000539587 WDR27A2RRH5 827 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 CASTOR2A6NHX0 329 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 DKC1O60832 514 aaKnown RBP eCLIP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 ERLIN2O94905 339 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 KCNK5O95279 499 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 SEC24AO95486 1093 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 EDN1P05305 212 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 EPHA5P54756 1037 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 ELAVL2Q12926 359 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 GRM2Q14416 872 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 PRR23BQ6ZRT6 265 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 Q6ZUG5 572 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 OTUD6AQ7L8S5 288 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 MFSD6LQ8IWD5 586 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 TCEAL8Q8IYN2 117 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 FAM177A1Q8N128 213 aaPredicted RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 ZNF461Q8TAF7 563 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 HASPINQ8TF76 798 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 SMARCD2Q92925 531 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 IRF7Q92985 503 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 BRF1Q92994 677 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 RSPRY1Q96DX4 576 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 DYDC2Q96IM9 177 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 LOXL4Q96JB6 756 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 LRRC3BQ96PB8 259 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 PPP1R10Q96QC0 940 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 MTRQ99707 1265 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 LXNQ9BS40 222 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 LRRC3Q9BY71 257 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 BRD9Q9H8M2 597 aa8.01□□□□□ -1.13
LRTOMT-217ENST00000539587 ZFP14Q9HCL3 533 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms