RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 OTUD6AQ7L8S5 288 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 CEP57Q86XR8 500 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 HAS1Q92839 578 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 KCNB2Q92953 911 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 TRMT61BQ9BVS5 477 aaKnown RBP18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 TMEM121BQ9BXQ6 578 aaPredicted RBP18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 BRD9Q9H8M2 597 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 ZFP14Q9HCL3 533 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 BMP2KQ9NSY1 1161 aaPredicted RBP18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 WASF3Q9UPY6 502 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 WDFY3Q8IZQ1 3526 aa18.02■□□□□ 0.47
CHMP4A-203ENST00000527154 CASTOR2A6NHX0 329 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 CHURC1-FNTBB4DL54 471 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 ZBTB39O15060 712 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 ABLIM3O94929 683 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 LYPLA2O95372 231 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 NPTXRO95502 500 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 HOXB3P14651 431 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 FNTBP49356 437 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 RBM25P49756 843 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 PPP4R3AQ6IN85 833 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 VITQ6UXI7 678 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 FAM160A2Q8N612 972 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 KDF1Q8NAX2 398 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 DEPDC1BQ8WUY9 529 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 MSANTD3Q96H12 275 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 LOXL4Q96JB6 756 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 PRIMPOLQ96LW4 560 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 CXCL16Q9H2A7 254 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 PIAS3Q9Y6X2 628 aa18.01■□□□□ 0.47
CHMP4A-203ENST00000527154 NCANO14594 1321 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 RALGAPA1Q6GYQ0 2036 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 WDR27A2RRH5 827 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 TBX3O15119 743 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 THP07101 528 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 ZNF806P0C7X5 589 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 PTPN2P17706 415 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 PSMC3P17980 439 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 GLRA2P23416 452 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 CCR2P41597 374 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 NLRP5P59047 1200 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
CHMP4A-203ENST00000527154 SRSF5Q13243 272 aaKnown RBP18■□□□□ 0.47
CHMP4A-203ENST00000527154 GRM2Q14416 872 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 FAM187BQ17R55 369 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 PLA2G2CQ5R387 149 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 IL31Q6EBC2 164 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 C1orf228Q6PIY5 440 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18■□□□□ 0.47
CHMP4A-203ENST00000527154 CDR2LQ86X02 465 aaPredicted RBP18■□□□□ 0.47
CHMP4A-203ENST00000527154 BLIDQ8IZY5 108 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 ZNF461Q8TAF7 563 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
CHMP4A-203ENST00000527154 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 RXFP3Q9NSD7 469 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 RGL1Q9NZL6 768 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 PARP2Q9UGN5 583 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 CDY1Q9Y6F8 540 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 LAMA1P25391 3075 aa18■□□□□ 0.47
CHMP4A-203ENST00000527154 MOSPD3O75425 235 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 IGFBP6P24592 240 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 EPHA5P54756 1037 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 ACAP1Q15027 740 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 XKR9Q5GH70 373 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 BRF1Q92994 677 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 LSM14BQ9BX40 385 aaKnown RBP17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 FZD8Q9H461 694 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 PKD1L2Q7Z442 2459 aa17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 ANKRD11Q6UB99 2663 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-203ENST00000527154 IGF2RP11717 2491 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 ZNF197O14709 1029 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 DGAT1O75907 488 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 GALNT17Q6IS24 598 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 Q6ZUG5 572 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 WDR5BQ86VZ2 330 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 TCEAL8Q8IYN2 117 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 SMARCD2Q92925 531 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 C2orf42Q9NWW7 574 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
CHMP4A-203ENST00000527154 RECQL4O94761 1208 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 SLITRK3O94933 977 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 EPN2O95208 641 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 KCNK5O95279 499 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 CPA1P15085 419 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 ATF2P15336 505 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 GDI1P31150 447 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 ROR1Q01973 937 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 SF3A2Q15428 464 aaKnown RBP17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 MFSD6LQ8IWD5 586 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 DYDC2Q96IM9 177 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 ZSWIM3Q96MP5 696 aa17.97■□□□□ 0.47
CHMP4A-203ENST00000527154 PPP1R10Q96QC0 940 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms