RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 PROZP22891 400 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 GJB2P29033 226 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 STRN3Q13033 797 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 MPZL3Q6UWV2 235 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 ANKS3Q6ZW76 656 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 TAS1R3Q7RTX0 852 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 KCNK18Q7Z418 384 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 SLC44A3Q8N4M1 653 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 RTP3Q9BQQ7 232 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 BACE2Q9Y5Z0 518 aa21.88■■□□□ 1.09
UBE2D3-220ENST00000505307 H0YCG3 227 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 SLC16A4O15374 487 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 C8AP07357 584 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 PLS3P13797 630 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 KCNE1P15382 129 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 FSHRP23945 695 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 ZRSR1Q15695 479 aaKnown RBP21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 GET4Q7L5D6 327 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 FLCNQ8NFG4 579 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 AK8Q96MA6 479 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 FAM86C1Q9NVL1 165 aa21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-220ENST00000505307 VWA3AA6NCI4 1184 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 ANHXE9PGG2 379 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 TOM1L1O75674 476 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 SRFP11831 508 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 AOC1P19801 751 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 RPL9P32969 192 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 OR1D2P34982 312 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 ZPBP2Q6X784 338 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 SIX5Q8N196 739 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 CEP120Q8N960 986 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 SNX27Q96L92 541 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 PNMA5Q96PV4 448 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 CNTN3Q9P232 1028 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.86■■□□□ 1.09
UBE2D3-220ENST00000505307 SFI1A8K8P3 1242 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 H0Y858 1186 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 ABLIM1O14639 778 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 ADAM12O43184 909 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 BMP15O95972 392 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 SCP2P22307 547 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 SLC12A3P55017 1021 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 OSTNP61366 133 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 AXDND1Q5T1B0 1012 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 CWF19L1Q69YN2 538 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 CD300LGQ6UXG3 332 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 GRASPQ7Z6J2 395 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 TMEM161BQ8NDZ6 487 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 RSAD2Q8WXG1 361 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 LARSQ9P2J5 1176 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 CDH7Q9ULB5 785 aa21.85■■□□□ 1.09
UBE2D3-220ENST00000505307 DOCK8Q8NF50 2099 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 SYN3O14994 580 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 PLA2G4BP0C869 781 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 NPR3P17342 541 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 HTR4Q13639 388 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 TMEM119Q4V9L6 283 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 SLC7A14Q8TBB6 771 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 KCNN1Q92952 543 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 GOLGA2P5Q9HBQ8 144 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 CDY1Q9Y6F8 540 aa21.84■■□□□ 1.09
UBE2D3-220ENST00000505307 PROB1E7EW31 1015 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 PODXLO00592 558 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 NARSO43776 548 aaKnown RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 MAPTP10636 758 aaKnown RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 TKTP29401 623 aaKnown RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 SOX4Q06945 474 aaPredicted RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 NOLC1Q14978 699 aaKnown RBP eCLIP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 LARP1BQ659C4 914 aaKnown RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 C3orf58Q8NDZ4 430 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 CALML4Q96GE6 196 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 ZMAT2Q96NC0 199 aaKnown RBP21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 SLC2A4RGQ9NR83 387 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 KCNH3Q9ULD8 1083 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 ODF2LQ9ULJ1 636 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 POLIQ9UNA4 740 aa21.83■■□□□ 1.09
UBE2D3-220ENST00000505307 H7C4K7 107 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 CCL16O15467 120 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 CLDN3O15551 220 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 CD2BP2O95400 341 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 CFHP08603 1231 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 UBA7P41226 1012 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 BRCC3P46736 316 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 MCL1Q07820 350 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 RAD51AP2Q09MP3 1159 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 SLC8B1Q6J4K2 584 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 MTSS1LQ765P7 747 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 BRAPQ7Z569 592 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 ZNF461Q8TAF7 563 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 PLEKHA5Q9HAU0 1116 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 NUB1Q9Y5A7 615 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 VWA8A3KMH1 1905 aa21.82■■□□□ 1.08
UBE2D3-220ENST00000505307 TRIP11Q15643 1979 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 HARSP12081 509 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 RFX1P22670 979 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 IGFBP6P24592 240 aaPredicted RBP21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 KYAT1Q16773 422 aa21.81■■□□□ 1.08
UBE2D3-220ENST00000505307 CCDC105Q8IYK2 499 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms