RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CCDC113Q9H0I3 377 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 ZKSCAN5Q9Y2L8 839 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
GAPVD1-219ENST00000495955 CYB561D2O14569 222 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 CYP26A1O43174 497 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ZNF18P17022 549 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 KCNA1Q09470 495 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 LIMA1Q9UHB6 759 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 TTLL3Q9Y4R7 772 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 LACTBL1A8MY62 500 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 CLTBP09497 229 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 SYN1P17600 705 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 HYIQ5T013 277 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 WDR49Q8IV35 697 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 NIF3L1Q9GZT8 377 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 FAM49BQ9NUQ9 324 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 GTF2IRD1Q9UHL9 959 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 SLC4A7Q9Y6M7 1214 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 DNM1LO00429 736 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ZBTB24O43167 697 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ERLIN1O75477 346 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 FGBP02675 491 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ZNF865P0CJ78 1059 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 PCBP1Q15365 356 aaKnown RBP eCLIP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 HELQQ8TDG4 1101 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 MBOAT7Q96N66 472 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 TSEN34Q9BSV6 310 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 SEZ6LQ9BYH1 1024 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 SPTLC3Q9NUV7 552 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 FLRT1Q9NZU1 646 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 ADAM22Q9P0K1 906 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 H7C4K7 107 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 LCP1P13796 627 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 SCNN1GP51170 649 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 CASP5P51878 434 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 PPIGQ13427 754 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■□□□□ 10.8
GAPVD1-219ENST00000495955 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 CDO1Q16878 200 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 JADE1Q6IE81 842 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 NT5C1AQ9BXI3 368 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 R3HDMLQ9H3Y0 253 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 RASAL2Q9UJF2 1139 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-219ENST00000495955 DARSP14868 501 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SLC9A1P19634 815 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SCLYQ96I15 445 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 ACO2Q99798 780 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 PADI3Q9ULW8 664 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 PIK3R2O00459 728 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 DHX15O43143 795 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 TLL1O43897 1013 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 AKAP3O75969 853 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CYP2C18P33260 490 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 DNAJC19Q96DA6 116 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CENPHQ9H3R5 247 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SCN9AQ15858 1988 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 MFAP3LO75121 409 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CYBAP13498 195 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SOX5P35711 763 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 GTF2BQ00403 316 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 MKRN4PQ13434 485 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 IRF5Q13568 498 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 PPP1R7Q15435 360 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 GLIS3Q8NEA6 775 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 RABGGTAQ92696 567 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CTAGE15A4D2H0 777 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CEP104O60308 925 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CTAGE8P0CG41 777 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 ACRP10323 421 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 TRIM60Q495X7 471 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 HSP90B2PQ58FF3 399 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 ARSHQ5FYA8 562 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CTAGE6Q86UF2 777 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 CTAGE4Q8IX94 777 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SHISA4Q96DD7 197 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 NAPGQ99747 312 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 C11orf70Q9BRQ4 267 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 TRPC7Q9HCX4 862 aa10.1□□□□□ -0.79
GAPVD1-219ENST00000495955 SOWAHDA6NJG2 315 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 SRGAP2BP0DMP2 458 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 KIF11P52732 1056 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 CENPPQ6IPU0 288 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 RUFY4Q6ZNE9 571 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 TOGARAM2Q6ZUX3 1019 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 TRAPPC11Q7Z392 1133 aa10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 NAP1L3Q99457 506 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
GAPVD1-219ENST00000495955 P4HA2O15460 535 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms