RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 GUCD1Q96NT3 240 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 GAD1Q99259 594 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TCHPQ9BT92 498 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 HAPLN2Q9GZV7 340 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 NKX2-4Q9H2Z4 354 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CLSTN2Q9H4D0 955 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 NRDE2Q9H7Z3 1164 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 RPF1Q9H9Y2 349 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 RXFP1Q9HBX9 757 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 GDPD2Q9HCC8 539 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TLR9Q9NR96 1032 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 DACH1Q9UI36 760 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ADAM28Q9UKQ2 775 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ITGA11Q9UKX5 1188 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 COG5Q9UP83 839 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PCDHA5Q9Y5H7 936 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 BACE2Q9Y5Z0 518 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TTC28Q96AY4 2481 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 DENND4CQ5VZ89 1909 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 GRXCR1A8MXD5 290 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PIRO00625 290 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 NRP1O14786 923 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 P4HA2O15460 535 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 STX10O60499 249 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 LILRB3O75022 631 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 UPP2O95045 317 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 OAZ2O95190 189 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 LETM1O95202 739 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 FGFR1OPO95684 399 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CYP11A1P05108 521 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ITGB1P05556 798 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SRGAP2BP0DMP2 458 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 MYBP10242 640 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 HOXB8P17481 243 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 TYMPP19971 482 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 FGFR3P22607 806 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CCNE1P24864 410 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 HOXA9P31269 272 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ATICP31939 592 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CTNNB1P35222 781 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 AFMP43652 599 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 RABGGTBP53611 331 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 FKBP3Q00688 224 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 DSG1Q02413 1049 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CACNB1Q02641 598 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 RNASELQ05823 741 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 GPM6BQ13491 265 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CAMK1Q14012 370 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 MRPL58Q14197 206 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 DHX8Q14562 1220 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SMC1AQ14683 1233 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 GRIN2CQ14957 1233 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SNRNP35Q16560 246 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 TMEM132AQ24JP5 1023 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CTC1Q2NKJ3 1217 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 KLHL40Q2TBA0 621 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SKOR2Q2VWA4 1001 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 USP41Q3LFD5 358 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PUS10Q3MIT2 529 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ZC2HC1CQ53FD0 456 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ANKS3Q6ZW76 656 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 LIMS2Q7Z4I7 341 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SYCP3Q8IZU3 236 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 TMEM86AQ8N2M4 240 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 TTC39CQ8N584 583 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 BEST2Q8NFU1 509 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CXorf38Q8TB03 319 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PIK3R5Q8WYR1 880 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SYAP1Q96A49 352 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SUSD3Q96L08 255 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ZFP42Q96MM3 310 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ZNF560Q96MR9 790 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 FAM193BQ96PV7 902 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PPP1R16BQ96T49 567 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 CDX2Q99626 313 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 C17orf80Q9BSJ5 609 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 HERC2P3Q9BVR0 1158 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PANK2Q9BZ23 570 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ZBP1Q9H171 429 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ZHX3Q9H4I2 956 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
HDAC6-223ENST00000480525 MARCH5Q9NX47 278 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 GDAP2Q9NXN4 497 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 SNTG2Q9NY99 539 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 PCDH10Q9P2E7 1040 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 ANKFY1Q9P2R3 1169 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 DSEQ9UL01 958 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 USP20Q9Y2K6 914 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 FAN1Q9Y2M0 1017 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 DAAM1Q9Y4D1 1078 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 MTCH2Q9Y6C9 303 aa5.52□□□□□ -1.53
HDAC6-223ENST00000480525 DOCK8Q8NF50 2099 aa5.51□□□□□ -1.53
HDAC6-223ENST00000480525 GREB1Q4ZG55 1949 aa5.51□□□□□ -1.53
HDAC6-223ENST00000480525 PRUNE2Q8WUY3 3088 aa5.51□□□□□ -1.53
HDAC6-223ENST00000480525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.51□□□□□ -1.53
HDAC6-223ENST00000480525 SOBPA7XYQ1 873 aa5.51□□□□□ -1.53
HDAC6-223ENST00000480525 MEIS3P2A8K0S8 358 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms