RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TRIM6Q9C030 488 aaPredicted RBP20.89■□□□□ 0.93
USP11-205ENST00000467378 HAPLN2Q9GZV7 340 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 CDT1Q9H211 546 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 SMOC2Q9H3U7 446 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 NXF3Q9H4D5 531 aaKnown RBP20.89■□□□□ 0.93
USP11-205ENST00000467378 SLC39A2Q9NP94 309 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 HES2Q9Y543 173 aa20.89■□□□□ 0.93
USP11-205ENST00000467378 CITO14578 2027 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 ANKRD63C9JTQ0 380 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 RHOBTB3O94955 611 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 ITGA4P13612 1032 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 STK4Q13043 487 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 KCNB1Q14721 858 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 DCAF4L1Q3SXM0 396 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 SLC39A4Q6P5W5 647 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 SPATA20Q8TB22 786 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 BICD1Q96G01 975 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 CASD1Q96PB1 797 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 IKZF4Q9H2S9 585 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 CDH22Q9UJ99 828 aa20.88■□□□□ 0.93
USP11-205ENST00000467378 DMDP11532 3685 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 DCHS1Q96JQ0 3298 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 TBKBP1A7MCY6 615 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 C2CD4DB7Z1M9 353 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 GOLGA6L22H0YM25 854 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 FSCN2O14926 492 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 HNRNPDLO14979 420 aaKnown RBP20.87■□□□□ 0.93
USP11-205ENST00000467378 EIF3DO15371 548 aaKnown RBP eCLIP20.87■□□□□ 0.93
USP11-205ENST00000467378 HOXA2O43364 376 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 OFD1O75665 1012 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 MCF2P10911 925 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 HOXB8P17481 243 aaPredicted RBP20.87■□□□□ 0.93
USP11-205ENST00000467378 HOXD13P35453 343 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 LIG4P49917 911 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 MCL1Q07820 350 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 KCNC3Q14003 757 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 ZNF568Q3ZCX4 644 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 STXBP4Q6ZWJ1 553 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 COLGALT1Q8NBJ5 622 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 KIAA0895Q8NCT3 520 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 HELQQ8TDG4 1101 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 SCFD1Q8WVM8 642 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 ERCC4Q92889 916 aaPredicted RBP20.87■□□□□ 0.93
USP11-205ENST00000467378 TCHPQ9BT92 498 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 TMEM117Q9H0C3 514 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 ENTPD7Q9NQZ7 604 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 SNTG2Q9NY99 539 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 HOOK1Q9UJC3 728 aaKnown RBP20.87■□□□□ 0.93
USP11-205ENST00000467378 EXOC7Q9UPT5 735 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 PCDHA5Q9Y5H7 936 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 STYXL1Q9Y6J8 313 aa20.87■□□□□ 0.93
USP11-205ENST00000467378 CLDN3O15551 220 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 CES5AQ6NT32 575 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 APBB1IPQ7Z5R6 666 aaPredicted RBP20.86■□□□□ 0.93
USP11-205ENST00000467378 CCDC47Q96A33 483 aaKnown RBP20.86■□□□□ 0.93
USP11-205ENST00000467378 APOL6Q9BWW8 343 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 TMEM206Q9H813 350 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 UBN1Q9NPG3 1134 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 HCSTQ9UBK5 93 aa20.86■□□□□ 0.93
USP11-205ENST00000467378 PDCD11Q14690 1871 aaKnown RBP20.86■□□□□ 0.93
USP11-205ENST00000467378 MED19A0JLT2 244 aaPredicted RBP20.85■□□□□ 0.93
USP11-205ENST00000467378 TISP43B9A030 160 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 ASGR2P07307 311 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 AKAP5P24588 427 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 CLCN5P51795 746 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 NOLC1Q14978 699 aaKnown RBP eCLIP20.85■□□□□ 0.93
USP11-205ENST00000467378 BMT2Q1RMZ1 405 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 HACE1Q8IYU2 909 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 CEP120Q8N960 986 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 FLCNQ8NFG4 579 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 GSDMAQ96QA5 445 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 TCF25Q9BQ70 676 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 POMKQ9H5K3 350 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
USP11-205ENST00000467378 ANKFY1Q9P2R3 1169 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 PUF60Q9UHX1 559 aaKnown RBP20.85■□□□□ 0.93
USP11-205ENST00000467378 GIT1Q9Y2X7 761 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 CACNA1BQ00975 2339 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 ANK1P16157 1881 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 ZMYM2Q9UBW7 1377 aa20.85■□□□□ 0.93
USP11-205ENST00000467378 UBE4BO95155 1302 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 A0A0B4J269 797 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 INPPL1O15357 1258 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 SMC2O95347 1197 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 GRM5P41594 1212 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 AFF1P51825 1210 aaKnown RBP20.84■□□□□ 0.93
USP11-205ENST00000467378 SLFN12LQ6IEE8 588 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 LRRC55Q6ZSA7 311 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 ABI1Q8IZP0 508 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 SYCP3Q8IZU3 236 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 GPT2Q8TD30 523 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 SMARCE1Q969G3 411 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 NECTIN4Q96NY8 510 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 MIOSQ9NXC5 875 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 PARP2Q9UGN5 583 aa20.84■□□□□ 0.93
USP11-205ENST00000467378 HIDE1A8MVS5 230 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 FAM189A1O60320 539 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 ADSSP30520 456 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms