RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-213	ENST00000466707	SMIM28	A0A1B0GU29	152 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	HOXA9	P31269	272 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	GRM5	P41594	1212 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	OSTN	P61366	133 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	RAB33A	Q14088	237 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	ZNF568	Q3ZCX4	644 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	PDXDC1	Q6P996	788 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	FGF14	Q92915	247 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	DDX27	Q96GQ7	796 aa	Known RBP	27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	TARS2	Q9BW92	718 aa	Known RBP	27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	TBC1D17	Q9HA65	648 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	HCFC1R1	Q9NWW0	138 aa		27.9	■■■□□ 2.06
ABCA2-213	ENST00000466707	ABLIM1	O14639	778 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	ANGPT1	Q15389	498 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	RINT1	Q6NUQ1	792 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	DCLRE1A	Q6PJP8	1040 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	PARM1	Q6UWI2	310 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	ALKAL1	Q6UXT8	129 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	ITFG1	Q8TB96	612 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	ZMAT2	Q96NC0	199 aa	Known RBP	27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	RAB34	Q9BZG1	259 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	CDH7	Q9ULB5	785 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	POLI	Q9UNA4	740 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	DNM3	Q9UQ16	869 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	CDY1	Q9Y6F8	540 aa		27.89	■■■□□ 2.06
ABCA2-213	ENST00000466707	STK25	O00506	426 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	MEFV	O15553	781 aa	Predicted RBP	27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	DMP1	Q13316	513 aa	Predicted RBP	27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	XKR4	Q5GH76	650 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	KRT79	Q5XKE5	535 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	C1orf186	Q6ZWK4	172 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	UROC1	Q96N76	676 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	MRPL4	Q9BYD3	311 aa	Known RBP	27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	TMEM134	Q9H6X4	195 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	STK24	Q9Y6E0	443 aa		27.88	■■■□□ 2.05
ABCA2-213	ENST00000466707	PRPH	P41219	470 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	FGF13	Q92913	245 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	SNX27	Q96L92	541 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	CCDC94	Q9BW85	323 aa	Predicted RBP	27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	KMT5A	Q9NQR1	393 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	ARHGEF3	Q9NR81	526 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	SLC2A4RG	Q9NR83	387 aa		27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.87	■■■□□ 2.05
ABCA2-213	ENST00000466707	SFI1	A8K8P3	1242 aa		27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	LAD1	O00515	517 aa		27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	XYLB	O75191	536 aa		27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	PROZ	P22891	400 aa		27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	YARS	P54577	528 aa	Known RBP	27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	DRC1	Q96MC2	740 aa		27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	DNMT3B	Q9UBC3	853 aa	Known RBP	27.86	■■■□□ 2.05
ABCA2-213	ENST00000466707	SLC16A4	O15374	487 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	POU2F2	P09086	479 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	RFX1	P22670	979 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	DTHD1	Q6ZMT9	781 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	ZBTB45	Q96K62	511 aa	Predicted RBP	27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	BACE2	Q9Y5Z0	518 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	RIF1	Q5UIP0	2472 aa	Known RBP	27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	FAM186A	A6NE01	2351 aa		27.85	■■■□□ 2.05
ABCA2-213	ENST00000466707	PODXL	O00592	558 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	HARS	P12081	509 aa	Known RBP	27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	GPC5	P78333	572 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	RAD51AP2	Q09MP3	1159 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	ZRSR1	Q15695	479 aa	Known RBP	27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	UVSSA	Q2YD98	709 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	ANKS3	Q6ZW76	656 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	NKD2	Q969F2	451 aa	Predicted RBP	27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	PNMA5	Q96PV4	448 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	DAXX	Q9UER7	740 aa	Predicted RBP	27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	MIA3	Q5JRA6	1907 aa		27.84	■■■□□ 2.05
ABCA2-213	ENST00000466707	PTPRZ1	P23471	2315 aa	Predicted RBP	27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	DCN	P07585	359 aa	Known RBP	27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	MCF2	P10911	925 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	ATP2C1	P98194	919 aa	Predicted RBP	27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	ROR1	Q01973	937 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	MCTP1	Q6DN14	999 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	PHLDB3	Q6NSJ2	640 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	MPZL3	Q6UWV2	235 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	NPAS3	Q8IXF0	933 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	ING5	Q8WYH8	240 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	C18orf25	Q96B23	403 aa	Predicted RBP	27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	DLGAP2	Q9P1A6	1054 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	CNTN3	Q9P232	1028 aa		27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	RBM19	Q9Y4C8	960 aa	Known RBP	27.83	■■■□□ 2.05
ABCA2-213	ENST00000466707	TRAPPC3	O43617	180 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	KCNE1	P15382	129 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	GUCY2C	P25092	1073 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	PABPC1L	Q4VXU2	614 aa	Known RBP	27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	SEZ6	Q53EL9	994 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	SPECC1	Q5M775	1068 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	VARS2	Q5ST30	1063 aa	Known RBP	27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	HYI	Q5T013	277 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	TMEM130	Q8N3G9	435 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	ACAP3	Q96P50	834 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	PLIN2	Q99541	437 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	FOXQ1	Q9C009	403 aa		27.82	■■■□□ 2.04
ABCA2-213	ENST00000466707	SLC38A7	Q9NVC3	462 aa		27.82	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms