RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ALKAL1Q6UXT8 129 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 CEP120Q8N960 986 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 CDK5RAP3Q96JB5 506 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 UROC1Q96N76 676 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 PLIN2Q99541 437 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 TARS2Q9BW92 718 aaKnown RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 CDT1Q9H211 546 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 TOPORSQ9NS56 1045 aaPredicted RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 CLUHO75153 1309 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 PLXNA3P51805 1871 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 ZMYND10O75800 440 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 B3GAT3O94766 335 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 PLA2G4BP0C869 781 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 MCF2P10911 925 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 PLS3P13797 630 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 FGFR3P22607 806 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 PROZP22891 400 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 IGFBP6P24592 240 aaPredicted RBP10.34□□□□□ -0.75
NUP50-205ENST00000419387 MRE11P49959 708 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 SMTNP53814 917 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 SLC12A3P55017 1021 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 OSTNP61366 133 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 RAD51AP2Q09MP3 1159 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 TCF15Q12870 199 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 STRN3Q13033 797 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 UPP1Q16831 310 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 ZNF568Q3ZCX4 644 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
NUP50-205ENST00000419387 ZBTB45Q96K62 511 aaPredicted RBP10.34□□□□□ -0.75
NUP50-205ENST00000419387 AK8Q96MA6 479 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 ACAP3Q96P50 834 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 MYADMQ96S97 322 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 EPS15L1Q9UBC2 864 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 FBXW11Q9UKB1 542 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 TRIOO75962 3097 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
NUP50-205ENST00000419387 ABLIM1O14639 778 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 TRAPPC3O43617 180 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 TOM1L1O75674 476 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 HNRNPA1P09651 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP50-205ENST00000419387 OR1D2P34982 312 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
NUP50-205ENST00000419387 RAB33AQ14088 237 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 TMEM119Q4V9L6 283 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 LIN9Q5TKA1 542 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 TMEM161BQ8NDZ6 487 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
NUP50-205ENST00000419387 ZMAT2Q96NC0 199 aaKnown RBP10.33□□□□□ -0.76
NUP50-205ENST00000419387 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 IRF2BPLQ9H1B7 796 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 MFSD1Q9H3U5 465 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 SLC38A7Q9NVC3 462 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP50-205ENST00000419387 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 C2orf16Q68DN1 1984 aa10.33□□□□□ -0.76
NUP50-205ENST00000419387 MTCL1Q9Y4B5 1905 aaKnown RBP10.33□□□□□ -0.76
NUP50-205ENST00000419387 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 H0YCG3 227 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 PODXLO00592 558 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 ADAM12O43184 909 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 BMP15O95972 392 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 C8AP07357 584 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
NUP50-205ENST00000419387 LAMP2P13473 410 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 KCNE1P15382 129 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 TKTP29401 623 aaKnown RBP10.32□□□□□ -0.76
NUP50-205ENST00000419387 UBA7P41226 1012 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 BRCC3P46736 316 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 CLCN5P51795 746 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
NUP50-205ENST00000419387 UVSSAQ2YD98 709 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 ARSHQ5FYA8 562 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 PPM1LQ5SGD2 360 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 ANKS3Q6ZW76 656 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 SLC44A3Q8N4M1 653 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 RSAD2Q8WXG1 361 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 CALML4Q96GE6 196 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 SNX27Q96L92 541 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 CNTN3Q9P232 1028 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 LARSQ9P2J5 1176 aaKnown RBP10.32□□□□□ -0.76
NUP50-205ENST00000419387 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 BACE2Q9Y5Z0 518 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
NUP50-205ENST00000419387 I3L4J1 428 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 CLDN3O15551 220 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 NARSO43776 548 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms